<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP12000
Description |
mediator of RNA polymerase II transcription subunit 26 isoform X1 |
Sequence | MTSATATPQEMRDRLMQAIDGQSNQICNMVAVMEVISYLEKYPITKEALEETRLGKLINDVRKKTKDEDLAKRAKKLLRTWQKLIEPGQSEALSKGHMGPPGTANGGMHPCRMDVSPPAAIPPSGKMVPELKSRNDFNNRYSPKAEKSGNRKRKGEQRDRRHIPVKISKITAYERTHNSRLPTNGIGASPEAFTDTCDPHPHLKSDKDSAELLDIDRLNKIPVNAVKPHPSSPGVAKPPSTSTLLKTAVLQQHGKMDLAVSGGGPHQPKHPRSNSHSPRSTKQDAVVKLSTTKSTTLLSPARSPRVMDSSGLGPSPLHSPQLLTPCMQGSLTIGPLPAESALHWDGPADVDQRLQQSTRRPDFLHSKASSQSEVKAEGDGSVTSTERKRRKKYRSRDYTVNLGGQPTEETTMPCRLKDRRLTFDPVTGQIKPSTLKESYPERAATVAPVTPELPRTELLKQNHCAQNSPVTPSPFQQTNWEELSRNEIIQSYLNRQSNVLTSSGAQTSGAHFFMSEYLKHEEHHIKEGRRKHMLVPNIPDTDLPGVSREVTNEDLNRIHKEHWPGVNGCYDTKDNWYEWTECISLDSHGDEGKLNILPYVCLD |
Length | 603 |
Position | Unknown |
Organism | Salmo salar (Atlantic salmon) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Protacanthopterygii> Salmoniformes>
Salmonidae> Salmoninae> Salmo.
|
Aromaticity | 0.04 |
Grand average of hydropathy | -0.853 |
Instability index | 57.65 |
Isoelectric point | 9.18 |
Molecular weight | 67084.99 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP12000
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 91.20| 20| 20| 432| 451| 1
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411- 428 (27.17/16.23) ..T..MPCRLKDRRLTFDPVTG
432- 451 (35.85/24.10) PST..LKESYPERAATVAPVTP
454- 472 (28.18/17.15) PRTelLKQNH...CAQNSPVTP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 279.65| 87| 113| 116| 207| 2
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116- 207 (138.88/85.84) SPPAAIPPSGKMVpeLKSRNDFNNRYSPKAEKSGNRKRKGEQRDRRHIP..VKISKITAYERTHNSRLPTNgiGASPEAFTDT.CDPHPhLKSDK
232- 321 (140.77/72.92) SPGVAKPPSTSTL..LKTAVLQQHGKMDLAVSGGGPHQPKHPRSNSHSPrsTKQDAVVKLSTTKSTTLLSP..ARSPRVMDSSgLGPSP.LHSPQ
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