<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11918

Description "glutenin, high molecular weight subunit PW212-like"
SequenceMATQNNSDLLVSGSTSEPGSGVVKPTENHVGVPQVGSEEVVPSEEGGEKGTIGNKKRSSFQITSVKIAKSNRQANDTINEGDADSIDELEESHTEDLSSELLDSSKVTEIHDGNESSDEETTTDQQLEIEGENKETASRFKVVKIASKEPFCRGRWSCFDFLDPPVVEKMDGVGEGSGTGSGNSSAASSVHYIPGVDDPTKNPFNPLSPIKSPPNSMEMMVPVILQTEHHNVIVVPQPVYGMGEEHSVINETGALPLSMNSHSIGGQNGAMTQTVPSTDYPQPPIASLHLSMPQVQAAEGGGYAQSNQPVLGTQNSNFIPVGGGPGGGPSSQQQQQQQQGQQQQQHYHQSQGPSGQVASQSQQQQPVSSSQQQQQNAAAAAAGQMLQQQQQPQQQQQQQQPGATGGSASQAGVQQPPPQPQQQQQLPPGTEGLVPQGIPPNQPPLQGSDPSAPRKPSSQAQGTQDSDDLQQMVPAMMTGNAGYPLDGTPATDMDGNQLSIDVKETAAQTAAVLTPPLLEVMGTAIGPLAGSTETKGEEGDER
Length542
PositionKinase
OrganismLingula unguis
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Brachiopoda> Linguliformea> Lingulata> Lingulida> Linguloidea> Lingulidae> Lingula.
Aromaticity0.03
Grand average of hydropathy-0.788
Instability index66.74
Isoelectric point4.40
Molecular weight56867.22
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11918
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     190.28|      23|      23|     388|     410|       1
---------------------------------------------------------------------------
  333-  360 (34.91/10.04)	QQQQQ...QQGQQQQQhyhqsQGPSGQVASQ
  362-  387 (31.40/ 8.21)	QQQQPvssSQQQQQNA.....AAAAAGQMLQ
  388-  410 (47.39/16.55)	QQQQP...QQQQQQQQ.....PGATGGSASQ
  414-  436 (41.93/13.70)	QQPPP...QPQQQQQL.....PPGTEGLVPQ
  437-  459 (34.66/ 9.91)	GIPPN...QPPLQGSD.....PSAPRKPSSQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     162.33|      50|      68|     172|     239|       2
---------------------------------------------------------------------------
  172-  222 (84.42/23.53)	GVGEGSG..TGSGNSSAASSVHYIPGVDDPTKNPFnPLSPIKSPP.NSMEMMVP
  241-  293 (77.91/32.69)	GMGEEHSviNETGALPLSMNSHSIGGQNGAMTQTV.PSTDYPQPPiASLHLSMP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.98|      12|      23|     295|     308|       3
---------------------------------------------------------------------------
  295-  308 (17.43/12.73)	VQAAEGGGyaQSNQ
  321-  332 (24.55/11.33)	VGGGPGGG..PSSQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.10|      11|      30|     461|     471|       5
---------------------------------------------------------------------------
  461-  471 (20.34/ 9.88)	QGTQDSD.DLQQ
  486-  497 (16.76/ 6.89)	DGTPATDmDGNQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11918 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GEEHSVINETGALPLSMNSHSIGGQNGAMTQTVPSTDYPQPPIASLHLSMPQVQAAEGGGYAQSNQPVLGTQNSNFIPVGGGPGGGPSSQQQQQQQQGQQQQQHYHQSQGPSGQVASQSQQQQPVSSSQQQQQNAAAAAAGQMLQQQQQPQQQQQQQQPGATGGSASQAGVQQPPPQPQQQQQLPPGTEGLVPQGIPPNQPPLQGSDPSAPRKPSSQAQGTQDSDDLQQMVPAMMTGNAGYPLDGTPATDMDGNQLSIDVKETAAQTAAVLTPPLLEVMGTAIGPLAGSTETKGEEGDER
2) MATQNNSDLLVSGSTSEPGSGVVKPTENHVGVPQVGSEEVVPSEEGGEKGTIGNKKR
3) TSVKIAKSNRQANDTINEGDADSIDELEESHTEDLSSELLDSSKVTEIHDGNESSDEETTTDQQLEIEGENKET
4) VEKMDGVGEGSGTGSGNSSAASSVHYIPGVDDPTKNPFNPLSPIKSP
243
1
63
167
542
57
136
213










Molecular Recognition Features






MoRF SequenceStartStop




NANANA