<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11875
Description |
mediator of RNA polymerase II transcription subunit 23 isoform X4 |
Sequence | METQLQSIFEEVVKTEIIEEAFPGMFMDTPEDEKTKLISCLSAFRQFWNGLSQESHEQCIQWIVKFIHGQHSPKRISFLYDCLAMAVETGVLPPRIVCESLINSDTLEWERTQLWALTFKLVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAKELLGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPATLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQTLNIAQQKQRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDINKPQSTHAFAMTCIWIHLNRKAQNGDSNLQIPIPHSLKLHHEFLQQSLRNKSLQMNDYKIALLCNAYSTNSECFTLPMGALVETIYGNGIMKIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHTKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTDQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITQFSVQGFPPLFLCLLWKMLLETDHISQIGYRVLDRIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVNDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMYLRKRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKNAMNAREDNPWVPEDSYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNVVLKSQPLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVSVISSNSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEVLLPIVKTEYQLLYVYHLVGPFLQRFQQERTRCMIEIGVAFYDMLLNVDQCSTHLNYMDPICDFLYHMKYMFTGDSVKEQVEKIICNLKPALKLRLRFITHISKLEPAAVPQPAVNSGSPAPQSTQVPAPLPVTQ |
Length | 1340 |
Position | Tail |
Organism | Dipodomys ordii (Ord's kangaroo rat) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Glires> Rodentia> Castorimorpha> Heteromyidae>
Dipodomyinae> Dipodomys.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.017 |
Instability index | 45.04 |
Isoelectric point | 6.89 |
Molecular weight | 153041.05 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP11875
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 215.31| 52| 95| 1037| 1088| 1
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781- 823 (45.81/24.17) .........RVLDRIGARALvahvRTFA..DF.....LVYEFSTSAGGQQLNKCIEI..LN
1037- 1088 (92.51/56.37) DSYYCKLIGRLVDTMAGKSP....GPFPNCDW.....RFNEFPNPAAHALHVTCVELMALA
1130- 1184 (76.99/45.67) EPYWIVLHDRIVSVISSNSL....T..SETEWvgypfRLFDFTACHQSYSEMSCSYTLALA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 92.67| 19| 95| 881| 899| 2
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881- 899 (40.52/25.94) PEHWLQNDWHTKH.MNYHKK
973- 991 (33.36/19.98) PVTYLYNTLHYYE.MYLRKR
1011- 1026 (18.79/ 7.86) PQGWCLSDTYLKNaMN....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 158.49| 35| 81| 350| 384| 4
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350- 384 (59.72/34.47) QFISGSIQKNAL..ADFLPVMKLF...DLLYPEKECIPVP
428- 463 (50.09/27.75) EFLQQSLRNKSLqmNDY.KIALLC...NAYSTNSECFTLP
676- 710 (48.68/26.76) ...SDSIQGTWC..KDILQTIMNFtphNWASHTLSCFPAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.96| 12| 44| 203| 214| 6
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203- 214 (23.75/14.62) ICNSWKLDPATL
249- 260 (22.22/13.19) VCNMLGLNKQTL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 202.84| 69| 81| 488| 565| 7
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472- 551 (80.57/73.19) YGNGIMKIPLPGTscLASGSITPLpMNLLDSLTVhaKMSLIHSiATRVIKLAHTKSsvaLApALVETYSRLLvYMEIESL
552- 620 (122.27/71.30) GIKGFISQLLPTV..FKSHAWGIL.HTLLEMFSY..RMHHIQP.HYRVQLLSHLHT...LA.AVAQTDQNQL.HLCVEST
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.34| 13| 649| 302| 318| 10
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272- 284 (21.27/ 9.37) LEDQLVDLVVYAM
306- 318 (22.08/ 6.46) LSSQLIFFVLFQF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 97.81| 21| 301| 949| 969| 12
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949- 969 (36.10/20.89) LLPVSKSLETLL..DHLGG..LYKF
1207- 1231 (26.09/13.03) LLPIVKTEYQLLyvYHLVGpfLQRF
1250- 1269 (35.62/20.52) LLNVDQC.STHL..NYMDP..ICDF
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