<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11844

Description U-box domain-containing protein 52-like
SequenceMQRITAGATTTTATTVIAINAGRNSQHAVKWAVDHILKKNSNCILIHVRTKPMHSNDYFDDVPKHGRPPTQEELHQFFLPFRGFCARKGIEAKELVLHDIDVPSALTDYVVENSINNIVVGACTSPWSAIIRRFKDIDVASTLAKSLPESCTLYVISKGKVQNIRPTGNPIPHHQKNNQPQNDEATPTRSIRDIFTLLQNAQLINRNKFLADSLDYEDVNRKPLKDAIDRDNSIKVWESLHDMKEGILMTPHNNKPNIDDLTSPRGPRLSAGSSSSLTSSNRSSPSNSTDSYAGRHGNHEGINSDSSKGLFSSKPPLQIGIEAEIKKLKLELKKTSEQYGMACREVVLAKLKATELENFRREKVHNVEKARQAEEAALALAEEERQRAKAALESAEMSKRLAEMETQKRKLAELKAKHEEEERRRTLQKVVYNSIPYRRYDIKEIEVATNGFDNALKIGEGGYGPVFKGVLDHTVVAIKVLRPDLAHGERQFQQEVLVLSAIRHPNMVLLLGACPEFGCLVYEHMENGSLEDRLFHKDGTPPIPWNNRFKIALEIATGLLFLHQRKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSIENKTTQYRLTGAAGTFCYIDPEYQQTGMLGVKSDIYSLGMVLLQIITAKPPMGLSHLVEEAIQKGNFSDVLDPSVPDWPIEEALSFAKLALKCCELRKRDRPDLGTVILPELNRISQIWECDED
Length727
PositionTail
OrganismCicer arietinum (Chickpea) (Garbanzo)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
Aromaticity0.06
Grand average of hydropathy-0.466
Instability index44.96
Isoelectric point7.92
Molecular weight81579.19
Publications
PubMed=26259924

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11844
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     218.65|      68|      75|     177|     247|       1
---------------------------------------------------------------------------
  177-  247 (106.71/85.86)	NNQPQNDEATPTRSIRdiFTLLQNAQLINRNKFL.ADSLDyEDVNRKPLKDAIDRDNSIKVWESLHDMKEGI
  253-  321 (111.94/78.01)	NNKPNIDDLTSPRGPR..LSAGSSSSLTSSNRSSpSNSTD.SYAGRHGNHEGINSDSSKGLFSSKPPLQIGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     232.28|      55|     133|     489|     545|       2
---------------------------------------------------------------------------
  491-  545 (103.77/68.29)	QFQQEVL..VLSAIRHPNMVL...L..LGACPEFGC..LVYEHMENGSLEDRLFHKDGT.....PPIP.W
  564-  624 (60.66/32.23)	QRKPEPL..VHRDLKPANILLdrnY..VSKISDVGLarLVPPSIENKTTQYRLTGAAGTfcyidP.....
  625-  681 (67.85/37.27)	EYQQTGMlgVKSDIYSLGMVL...LqiITAKPPMGLshLVEEAIQKGNFSDVL...D.......PSVPdW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.64|      10|      36|      97|     106|       3
---------------------------------------------------------------------------
   97-  106 (18.80/10.28)	LHDIDVPSAL
  134-  143 (17.84/ 9.46)	FKDIDVASTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.16|      19|      36|     368|     387|       5
---------------------------------------------------------------------------
  368-  387 (26.24/21.07)	EKARQAEEAAlALAEEERQR
  407-  425 (31.92/20.86)	QKRKLAELKA.KHEEEERRR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11844 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EGILMTPHNNKPNIDDLTSPRGPRLSAGSSSSLTSSNRSSPSNSTDSYAGRHGNHEGINSDSSKGLF
245
311










Molecular Recognition Features






MoRF SequenceStartStop




NANANA