<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11792

Description U-box domain-containing protein 35-like isoform X3
SequenceMAEEETIDSYSNNHTMIAISRDKNSQYAVKWAVEHLFNRKNTGDCILIHVRSQGLHPQEADSIPKEYRPPTEAELHQFFLPYRGFCARKGIVAKEIIIHDIDVPNALIDHVSKHSISNIVVGASNRNPIMRKFKNPDVATCLLKSAPESCSVYVIARGKVHTKRLRKRNKSQTDMNESQTGTPRVGSSLSKTRKSAYSSISGLSEDKYRDSSGTSNDSMSGISDFSGPLSFKSIETSFENLDFSPSSSETSTRSYVSSSTPPSIESEMKRLRFELKQMMEMYDSASKEAAVAKQKAKELEQLKMEKEEDDKIERGKSADEALTALAEFEKQKNKAAAEATLVAQKLAELETQKKQIITEEKARIEAEERKKTMELFERSNICYRRYSIDEIEVATDHFNESNKIGEGGYGPVYQALLDHTSVAIKILRPDRSHGQRQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFRKDNTPPIPWRIRFRIACDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHDKFPEILDPTITDWPIEDTLGLAQLALKCCELRKRDRPDLRTVLMPELSRLKNLGLGETPPKSKLANVSKAHDQQPPNSAPVLKGSESEEGMRNNPNVPMEIQRRSM
Length720
PositionTail
OrganismCucumis melo (Muskmelon)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
Aromaticity0.06
Grand average of hydropathy-0.560
Instability index50.28
Isoelectric point6.61
Molecular weight81171.40
Publications
PubMed=22753475

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11792
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     309.53|      96|     132|     454|     557|       1
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  454-  557 (151.99/141.71)	VLLLGACPEYGCLVYEYMENGSLEDRLFRKDNTPPIP.WRIrfriacDIATALLFLhQMKPEPVVHRDLKPANILLDHNyVSKIGDVGLARLVPPSVADSVTQYH
  589-  685 (157.54/119.60)	VLLLQLITARSPMGLSYQVEEAIEHDKFPEILDPTITdWPI......EDTLGLAQL.ALKCCELRKRDRPDLRTVLMPE.LSRLKNLGLGETPPKSKLANVSKAH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.20|      15|      16|     191|     205|       2
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  191-  205 (25.74/15.72)	KTRKSAYS...SISGLSE
  207-  224 (22.46/12.81)	KYRDSSGTsndSMSGISD
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     150.13|      47|     103|     129|     178|       3
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  129-  178 (75.65/62.83)	IMRKFKNPDVATcllKSAPESCSVYVIARG....KVHTKRLRKRNKSQTDMNES
  234-  284 (74.48/52.60)	IETSFENLDFSP...SSSETSTRSYVSSSTppsiESEMKRLRFELKQMMEMYDS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.05|      17|      18|     316|     332|       5
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  316-  332 (29.86/19.04)	KSADEA.LTA..LAEFEKQK
  334-  353 (19.19/ 9.93)	KAAAEAtLVAqkLAELETQK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11792 with Med32 domain of Kingdom Viridiplantae
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