Description | ATP-dependent DNA helicase Q-like 4A isoform X3 |
Sequence | MAKEVSMLEISLLFTRTKAFYYTGATDTGNLACQMQNLQRIQRSQIEKAWNALSNFQISCRHYAKLGNTRQVKDVFSDRPADSRRITSNSLSDANASSQHKKVHRHFSEYNVDTTKPSSFRSNLSASRNIKVMEDQNDVDGNNMARLRTINHSHFQRVGDSVSFATNQKNICPSFLEDEDDEIIENIDVDQIVEQYQSQSACTPQPSVSKLPPITPIFEKDNVAKQEESNYPDELCTNCSHGFKIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHISLDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMGSSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQLPALICPGVTLVISPLVSLIQDQIMHLIQANISAAYLSANMEWSEQQEIFRDLSSDCTKYKLLYVTPEKVAKSDFLLRHLESLNARHLLARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPKIPVLALTATATASVKEDVVQALGLINCIIFRQSFNRPNLWYSVIPKTKKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYCENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSMNLIEKDVTDIAKQLVDLVRSMGQQFSSAHILEVYRGSLSQFVKKHRHEKLSLHGAGKHLLKSDASRILHYLVIEDILVEEVKKNDIYGSVSSLLKVNETKVQSLLNGGQRITLRFPSITKTNKLSKFEMTPAKGSLVFGKMYPNIDTPAQPQSEVDVQLSAKLYSSLRMLRTNLVKEAADGVMAYHIFGNATLQQISRRVPRSKEELLDINGIGKAKVSKYGDRILETIESTINEFYGAGKNGSNSNDSNDSGKRRRGGNKDKDEYLDENDATKSFDRSKKRATNIQSIDPKVHNSSRPEHPDQFFDSELDFDDSHYEIRDLELNNNLDHGNDGRVLPSWS |
Length | 1176 |
Position | Unknown |
Organism | Cucumis melo (Muskmelon) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.556 |
Instability index | 52.70 |
Isoelectric point | 7.23 |
Molecular weight | 133542.26 |
Publications | PubMed=22753475 |
Annotated function |
|
GO - Cellular Component | plasmodesma GO:0009506 IEA:EnsemblPlants |
GO - Biological Function | 3'-5' DNA helicase activity GO:0043138 IEA:EnsemblPlants ATP binding GO:0005524 IEA:UniProtKB-KW hydrolase activity GO:0016787 IEA:UniProtKB-KW nucleic acid binding GO:0003676 IEA:InterPro |
GO - Biological Process | cellular response to abscisic acid stimulus GO:0071215 IEA:EnsemblPlants cellular response to cold GO:0070417 IEA:EnsemblPlants DNA replication GO:0006260 IEA:InterPro double-strand break repair via homologous recombination GO:0000724 IEA:EnsemblPlants |
Binary Interactions |
Repeats | >MDP11776 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 159.17| 40| 274| 392| 433| 1 --------------------------------------------------------------------------- 41- 86 (50.02/20.11) IQRSQiEKAWNAlSNFQISCRHYAklgNTRQVKDVFSDRPaDSRRI 96- 123 (36.74/16.66) ..ASS.QHKKVH.RHFS...EYNV...DTTK...PSSFRS.N.... 393- 432 (72.42/43.26) IEGSN.DKKWSS.RNFSWTKELEA...NNKKVFGNHSFRP.NQREV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 315.25| 96| 274| 631| 788| 2 --------------------------------------------------------------------------- 650- 748 (167.69/131.79) YCLSRMDCEKVAErLQECGHKaaFYHG....SMDPAQRS..FIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQE...CGRAGRDGLRS..SCVLYY 799- 905 (147.57/129.25) YCENDVDCRRLLQ.LVHFGEK..FDPGnckkTCDNCLKSmnLIEKDVTDIAKQLVDLVRSMGQQFSSAHILEVYRGSLSQFVKKHRHEklsLHGAGKHLLKSdaSRILHY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 100.19| 35| 152| 978| 1016| 7 --------------------------------------------------------------------------- 978- 1016 (46.99/50.19) PNIDTPAQPQ.......SEVDVQLSAklYS..SLRmLRTNLvKEAADG 1126- 1169 (53.20/37.77) PKVHNSSRPEhpdqffdSELDFDDSH..YEirDLE.LNNNL.DHGNDG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 85.17| 28| 772| 255| 283| 10 --------------------------------------------------------------------------- 255- 283 (40.28/31.49) LQELKDRLISISNDLLDnVNNLSPVQIDK 1028- 1055 (44.89/30.03) LQQISRRVPRSKEELLD.INGIGKAKVSK --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) QFFDSELDFDDSHYEIRDLELNN 2) RVLPSW | 1139 1170 | 1161 1175 |
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