<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11754

Description U-box domain-containing protein 51 isoform X1
SequenceMSPSSYPLEDGIPLNTTAVAIDKDKNSHHAVRWAIDHLVISNPLIILIHVRHKANQGASDSENGETDAQQLFVPYRGYCARKGVQLKEVVLDDPDISKALVDYVHKNCINSFVVGASTRSALARKFKAPDVPTSIIKTAPEFCSVYVISKAKIISARAALRPVANTAMPPRQPSPLGVQSNGQPDSSSEPENGAKMQVAKEGWKSAGTERMLAERNGGGKPAKALTRERPKTSPTNISLENIEVPNRGSRSSFSRDSISDDNMMTAQMAFGSMDATAQSLDFSASSNLSMDSASQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAIAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAEMKARREAEEKKRALNALAQNDVRYRKYTIEEIEESTEKFSEKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNSPPLSWRRRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADQVTQYHLTSAAGTFCYIDPEYQQTGKLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKDRFDEMLDPTISDCPLEEATNFAKLALKCAELRKRDRPDLGTVIVPELNRLRDIGRSSDKRESRNHYSRSSASASSSSSKPQSSNEDTRVIYTDEGS
Length743
PositionTail
OrganismCucumis melo (Muskmelon)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Cucurbitales> Cucurbitaceae> Benincaseae> Cucumis.
Aromaticity0.06
Grand average of hydropathy-0.535
Instability index50.05
Isoelectric point8.74
Molecular weight82354.62
Publications
PubMed=22753475

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11754
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     112.83|      30|      32|     350|     381|       1
---------------------------------------------------------------------------
  316-  336 (26.28/12.29)	...........DMYSSACKEAISAKNKARELS
  350-  381 (42.60/31.61)	RLAEEAALaiAEMEKAKCKAAIEAAEAAQKLA
  383-  410 (43.95/26.53)	REAQRRKQ..AEM.KAR.REAEEKKRALNALA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.44|      18|      34|     251|     268|       2
---------------------------------------------------------------------------
  251-  268 (32.50/19.91)	SSFSRDSISDDNM.MTAQM
  286-  304 (25.93/14.52)	SNLSMDSASQSTReLEAEM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.49|      27|      32|      94|     124|       3
---------------------------------------------------------------------------
   94-  122 (42.23/44.11)	PDISKALVDYVHKNCinS.FVVGA....STRSAL
  129-  160 (37.26/23.27)	PDVPTSIIKTAPEFC..SvYVISKakiiSARAAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.91|      26|      34|     503|     528|       6
---------------------------------------------------------------------------
  503-  528 (48.23/34.28)	YMHNGSLEDRLFRRGNSPPLSWRRRF
  540-  565 (44.69/31.18)	FLHQAKPEPLVHRDLKPANILLDRNF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11754 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LRDIGRSSDKRESRNHYSRSSASASSSSSKPQSSNEDTRVIYTDEGS
2) LRPVANTAMPPRQPSPLGVQSNGQPDSSSEPENGAKMQVAKEGWKSAGTERMLAERNGGGKPAKALTRERPKTSPTNISLENIEVPNRGSRSSFSRDSISDDNMMTAQMAFGSMDAT
697
160
743
276










Molecular Recognition Features






MoRF SequenceStartStop




NANANA