<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11669

Description U-box domain-containing protein 35 isoform X1
SequenceMSVQQPSGAPQPQNITMVAVDKDKNSAYAFRWAINHLDNPVIVAVHVKHKNLPNLGTNVYPPDEEDVALIFNNLRAMCQRKAVTMKEAVIDDHDVVKGLLDFANRNSIHSIVIGASNKNHLTSLKKFKVYHDIPAAIIKSAPDYCSVYIISKLKIASARSAVRSMGNGNQSIPSKLPVQVGQHAEFETGIRSVLPRSSVTNEGSESRSFDSITATKGQTRERPRSAGSNLSMDKIDIPGGRGRHWASMDERDMAALGPIDLDVPDSLGTPSASHTSKDLEAEMKRLRRELKQTMDMYSSACKQAISAKNQAEQIRRWKVEEERKVEEVRMSQEAALAMAEREKARAKAAMEAAEDAKRKAEQEAQRRREAEMKARKEAEERDRVLTALAQNDNRYRKYTMEEIEVATEKFSPSKKLGEGGYGPVYKGHLDHTAVAIKLLNPEASQGRKQFQQEVEVLSCIRHPNMVLLLGACPEHGCLVYEFMDNGSLEDRLFRKNNSRPLTWQKRFQISAEIATALLFLHQTKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPSSVVDNVTQYYMTSAAGTFCYIDPEYQQTGILTTKSDIYSLGVMLLQVITAKPPMGLAHHVKRAVEKDRIVEILDPAVTDWPVEAALSFAKLALGCVELSKKDRPNLATVVLPELNRLRDLGCTDNIVFTDTKNNSHSPRPPMPT
Length703
PositionTail
OrganismCicer arietinum (Chickpea) (Garbanzo)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
Aromaticity0.05
Grand average of hydropathy-0.478
Instability index43.79
Isoelectric point8.84
Molecular weight78431.71
Publications
PubMed=26259924

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11669
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      47.43|      10|      87|     280|     289|       1
---------------------------------------------------------------------------
  280-  289 (18.02/ 9.64)	EAEMKRLRRE
  333-  342 (14.24/ 6.25)	EAALAMAERE
  361-  369 (15.17/ 7.09)	EQEAQR.RRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     100.97|      23|      23|     230|     252|       4
---------------------------------------------------------------------------
  208-  230 (33.53/18.51)	SFDSI..TATKGQTRERPRSAGSNL
  231-  253 (42.31/25.20)	SMDKI..DIPGGRGRHWASMDERDM
  255-  278 (25.13/12.11)	ALGPIdlDVPDSLGTPSASHTSKD.
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11669 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RSVLPRSSVTNEGSESRSFDSITATKGQTRERPRSAGSNLSMDKIDIPGGRGRHWASMDERDMAALGPIDLDVPDSLGTPSASHTSKDLEAEMKRLRRELKQTMDMYSSACKQAI
2) VRMSQEAALAMAEREKARAKAAMEAAEDAKRKAEQEAQRRREAEMKARKEAEERDRVLT
191
328
305
386










Molecular Recognition Features






MoRF SequenceStartStop




NANANA