<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11654
Description |
mediator of RNA polymerase II transcription subunit 33B-like isoform X2 |
Sequence | MSMTVVWERVIEITKWAQEKKTEAVVWSIEVSSWLKTAGVSLPSVELAHRLVSHICWENHVAGTWKYLEKAMEVRMVPPLLVLALLSTKVVPNRHPLLHPSAYSLYLHLLNKHVFSLSSHINSPNYPSLMNSIHNVLRLSQLYDYYYDDDDDHPHPGVVLVHFLFTLVWQLLEASLQDEGLLQHNSLLFVDPDLDLTMELELELDNHHHNVHVNNNNSNKHTLHAKNTATAIQFIARFLHNKVTSRILSLVQRNMPTHWGAFVNELERLAAKSLILRSLKNVSPKSFFPLNFKSKKMKLSSVLAASASAVQSHNDSSLWLPIDLILEDAMDGDHVMAASAVELLTGLVKALQAVNATAWHNAFLGLWIAALRLVQRERDPCEGPVPRLDTCLCMLLCITTLVVANVIEEEEGELIEEAERSPTNQRKDKPALGKCRGELVTSLQLLGDYEDLLNPPQPVIWVANQAAAKAIMFVSGHSGYLEYMNLNDLPTNCSGNLWHLIIEACIARHLIDTSAYFWPGYVSSPCNQPLHSIPNHLPSWSSLMKGSPLTPPMVNALVATPASSLAEIEKIFEFAINGSDEEKISAATILCGASLVRGWNVQEHVVFFIIKLLSPPVPPKYSGTENHLISYAPFLNVLLVGISPVDSVQIFSLHGAVPLLAAALMPICEAFGSCVPSVSWTSATGDKLSCHAVFSNAFVLLLRLWRFNHPPVEHVMGGAATPALGSQLGPEYLLLVRNCMLASFGKSPRDRIRSRRFSKMISFSSEPLFMDSFPKLNTWYQQHQECLASTRCALVPGGPILQIVDALLSMTCRKINRSAQSLTSTTSGSSNSSGSSLDDALMKLKVPAWDILEAAPFVLDAALTACAHGRLSPRELATGLKDIADFLPATLATIVSYLSAEVTRGVWKPAFMNGTDWPSPAANLSIVEQQIKKILAATGVNVPSLAIDGNAPATLPLPLAAFLSLTITYKLDKSSERFLVLIGPSLINLSSGCPWPCMPIVGSLWAQKVKRWSDFFVFSASGTVFHHSRDAVVQLLKSCFTSTLGLGSACIYNNGGVGALLGHGFGSHFCGGISPVAPGILYLRVYRSIRDAMFLTEEIVSLLMLSVRDIASGGLPKGEAHKLKKAKYGMRYGQVSLAASMTRVKHAALLGASFLWISGGSSLVQSLITETLPSWFLSAQGLEQEVGESGVVVAILRGYALAYFAVLSGTFAWGIDSLSAASKRRPKVLGIHLEFLANALDGKISLRCDCATWRAYVSGFMSLMVSCTPLWIEELDASILKRVSKGLRQLNEDDLALHLLEIRGTSLMGEVAEMISQNGF |
Length | 1320 |
Position | Tail |
Organism | Cicer arietinum (Chickpea) (Garbanzo) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.192 |
Instability index | 45.26 |
Isoelectric point | 6.78 |
Molecular weight | 144508.80 |
Publications | PubMed=26259924
|
Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11654
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 199.89| 50| 52| 757| 808| 1
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703- 752 (48.16/19.54) RLWRFNHPPVehVMGgaATPALGS..QLGPEYLLLVRnCMLASFGksPRDR....I.....
759- 808 (89.00/49.84) KMISFSSEPL..FMD..SFPKLNTWYQQHQECLASTR.CALVPGG..PILQ....IVDALL
813- 863 (62.73/28.44) RKINRSAQSL..TST..TSGSSNSSGSSLDDALMKLK....VPAW..DILEaapfVLDAAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 62.57| 11| 17| 6| 16| 2
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6- 16 (22.35/13.53) VWERVIEITKW
26- 34 (18.09/ 9.45) VWS..IEVSSW
56- 65 (22.13/13.32) CWENHVAGT.W
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 193.50| 54| 55| 1166| 1220| 3
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1148- 1204 (73.20/52.50) ALL.GASFLWisGGSSL...vqSLI.TETLPS......WFLsAQGLEQEVGESGVVVAIL..RGYALAYF
1205- 1261 (75.05/49.28) AVL.SGTFAW..GIDSLSA......aSKRRPKvlgihlEFL.ANALDGKISLR.CDCATW..RAYVSGFM
1262- 1307 (45.25/26.29) SLMvSCTPLW...IEELDAsilKRV.................SKGLRQ.LNEDDLALHLLeiRGTSL...
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 79.94| 27| 48| 304| 332| 4
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304- 332 (42.70/35.94) AASASAVqsHND.SSLWL.PIDLIL..EDAMDG
353- 383 (37.23/23.92) AVNATAW..HNAfLGLWIaALRLVQreRDPCEG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 62.38| 19| 55| 95| 117| 5
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95- 117 (26.28/26.64) HPllHPSAysLYLHLLNKHVFSL
153- 171 (36.09/20.96) HP..HPGV..VLVHFLFTLVWQL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 111.40| 35| 49| 881| 915| 6
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881- 915 (60.04/36.70) KDIADFLPATLATIVSYL...SAEVTRGVWKPAFMNGT
929- 966 (51.37/30.25) QQIKKILAATGVNVPSLAidgNAPATLPLPLAAFLSLT
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