<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11651
Description |
mediator of RNA polymerase II transcription subunit 33A-like |
Sequence | MATAVPAQTIDADEQIPWLKVLRQTDLAIENNTDPNLWSTEITSTLLSSAVTFPSVELAHRLVSHLFWNNHSPTAWKLLHSAASFNIIPPLLLISLLSTRIVPSRELHPIAYRLYMELLKQNVFMLQSHIYSPNYQKIMESIDDVLQLSQVYSRKVCEPGVVLVEFVFSILWQLLEASLDDEGLLDHGPENKPRWISRSNAMSIDEPDCINGMKTEQKEGLQRENTAMAIEIIVEFLQNKMTLRLLSLVHRNMPSHWGSFNHQMQLLASNSSILKNLKHINADTLLSLMENIHGFGSNECNTTSKLESNVVISAGSQIYFAGQYYGSSWSSLWLPIDLILEDALDGGQVAAFSAIEIITGLVKILHAVNGTMWHKTFLGLWIAALRLVQRERDPNERPIPRLDTCMCMLLSITTHVVTNIIEEEESELIEEADSSPTNRGKNKQALGKRRGELITSLQFLGDYENLLTPPQAVLTEANQAAAKANMFVSGNPVGSGSSESLSMDDLPMNCSGNLWHLIVEACIARNLLDTSAYFWPGYVNACSNQTPCSVSKHMDGWSSLMKGSQLTPGLVDVLAATPASSLAEIEKIYEIAINGSDEEKISAATILCGASLVRGWNVQEHTLLFITNLLSPICPPNHTETENHLISQAPFLNVLLVGISSVDCVHIFSLHGLVPLLAAGLMLICEVFGSCVPDVSWTVKTEEKVSHCEVFSNAFTLLLRFWRFDFLPAEQVRSNAATPPLGSLFSPEFLLLVRNYRVASFGRSAKDSLKLKRLSKLLHFSKEPVFMDSFPKLNFWYQQHQECIASIRSGLVPGGPVHQIVDALLSMMFRKVNDGSEPSTPSTLGSSSSCGSGSALDDALMKLKVSAWDILKAIPFVLDASLNACAYGRVSTRELATGLKDLADFLPASLVTIASYFKAEVTRGIWKPAFMNGTDWPSPAANLSLVEQQIKEILAATGVDVPSLAVDGDSQATLPLPLAAFVSLSITYKLEKGTGRFLVLIAPALNALASGCPWPCMPILTSLWIQKVKRWSEYFVFKASGTVFHHNRDAVVQLLKSCFTSTLGLGSTGINNSGGIGALLGHGLVSQAAGGISPVAPGILYLRVYRSIGDIMFLNKEIMSILMLSVRDIANSELPKDNVKKQLKNGMKFGQVSLPRYMARVKHAALLGASLVWISGGSKLVQSLIGDTVPSWFLSADMLEQDGGESGVLVAMLRGYALAFFVMLSAAFAWGIDHYSVPPKRRARVIGLHLEFLASTLEGNTSLCCHCATWRTYVSGFVGLMVGCTPMWVREADVELLKRLSKGLRQLDEHELALRLLEIGGIGVMGAAAEMIIEIERRL |
Length | 1339 |
Position | Tail |
Organism | Cicer arietinum (Chickpea) (Garbanzo) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.153 |
Instability index | 44.94 |
Isoelectric point | 6.00 |
Molecular weight | 146930.28 |
Publications | PubMed=26259924
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Function
Annotated function |
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GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11651
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.13| 15| 19| 508| 525| 1
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508- 522 (30.59/20.80) MNCSGNLWHLIVEAC
528- 542 (30.54/12.70) LDTSAYFWPGYVNAC
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 220.06| 82| 361| 557| 668| 2
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62- 102 (37.29/ 9.20) LVSHLFWNNHSPTAWKLLHSAASFNIipplLLISLLSTRIV.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
568- 616 (51.70/65.09) .........................................psrelhpiayrlymellkqnvfmlqshiyspnyqkimesiddvlqlsqvysrkvcepgvvlvefvfsilwqlleaslddeglldhgpenkprwisrsnamsidepdcingmkteqkeglqrentamaieiiveflqnkmtlrllslvhrnmpshwgsfnhqmqllasnssilknlkhinadtllslmenihgfgsnecnttsklesnvvisagsqiyfagqyygsswsslwlpidliledaldggqvaafsaieiitglvkilhavngtmwhktflglwiaalrlvqrerdpnerpiprldtcmcmllsitthvvtniieeeeselieeadssptnrgknkqalgkrrgelitslqflgdyenlltppqavlteanqaaakanmfvsgnpvgsgsseslsmddlpmncsgnlwhliveaciarnlldtsayfwpgyvnacsnqtpcsvskhmdgwsslmkgsqltPGLVDVLAAtpasSLAEIEKIY.....EIAINGSDEEKISAATILCGA..SLVRGW
629- 722 (131.06/81.16) LLSPICPPNHTETENHLISQAPFLNV....LLVGISSVDCV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................hifslHGLVPLLAA....GLMLICEVFgscvpDVSWTVKTEEKVSHCEVFSNAftLLLRFW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.03| 13| 356| 489| 505| 3
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489- 505 (20.30/16.51) SGNPVGSGSSeslsMDD
846- 858 (24.73/11.03) SSSSCGSGSA....LDD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 202.77| 64| 77| 929| 1005| 5
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886- 951 (106.06/64.57) AYGRVSTRELATGLKDLADF.LP.ASLVTIASYFKAEVTRGIW.......kpAFMNGTDWPSPAANLSLVEQQIK
955- 1029 (96.71/71.18) AATGVDVPSLAVDGDSQATLpLPlAAFVSLSITYKLEKGTGRFlvliapalnALASGCPWPCMPILTSLWIQKVK
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