<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11634
Description |
mediator of RNA polymerase II transcription subunit 33A isoform X3 |
Sequence | MLYQEMELDGHDNYNDKNTEQNEKLHSANTLMAVEIIGRFLQDRVTSRILCLARRNLPAHWLSFVQRLQLLGANSLALRKSKTLSPEALLHLTSDTCMVLSQESKTNSQQKFHKVMAFEYLSSSASLCHGASHSALWIPLDLVLEDAMDGYQVSATSAVEEISGLIKTLRAINGTSWHDTFLGLWFASLRLVQRERDPIEGPMPHLDTRLCMLLCITPLVVANLIEEEEPIPIDEKDSVTDHWKEKRVPGKCRNDLVSSLQVLGDYQSLLTPPQSVITAANQAAAKAMLFISGITVGSAYFDCLAMTEMPVDCSGNMRHLIVEACIARNLLDTSAYLWPGYGNGHINQRPQCMPAPVPGWSSFMKGEPLTSVLVNALVSSPATSLAELEKIFEFAIAGSEDEKISAATILCGASLIRGWNIQEHTVHFILRLLSPRVPVENTEGNNYLINYAPILNALFVGIASIDCIQVFSLHGLVPQLACSLMPICEVFGSCVPNISWTLTSGEEISAHAVFSNVFILLLKLWRFNRPPLDHGIGDVPTVGSQLTPEYLLLVRNSHLMSAGNNCKDRNRRRLSEIASLSSPNSVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPFHQIVEGLLNMMFRKINRGNQTTITVPSGSSSSSGPVNEDASIGPMLPAWDILEAIPFVVDAALTACAHGRLSPRELATGLKDLADFLPASLATIISYFSAEVTRGVWKPAFMNGTDWPSPAANLLNVEEQIKKILAETGVVVPSLAPVVAISTGDSSPATLPLPLAAFTSLTITYKVDRSSERFLHLAGQTLEGLAAGCPWPCMPIVASLWTQKAKRWSDFLIFSASRTVFLHNSDAVVQLVKSCFTATLGMSSSPISCSGGVGALLGHGFKSNLSGGICPVAPGILYLRAYRSIRDIVFLTEEIVSILMQSVREIVCGGLPKQRLKKSKATKDSIKYGQVSLAASMTRVKLAAALGASLVWISGGLTLVQLLIKETLPSWFISVHRSDQEEKSNGMVAMLGGYALAYFAVLSGAFAWGVDSSSSASKRRPKVLGTHMEFLASALDGNISLGCDPATWRAYVSGFVSLMVSCTPNWVLEVDVHVLKRLSNGLRQLNEEELALALLGAGGVGTMGAAAELIIDTEM |
Length | 1143 |
Position | Tail |
Organism | Cicer arietinum (Chickpea) (Garbanzo) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade>
NPAAA clade> Hologalegina> IRL clade> Cicereae> Cicer.
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Aromaticity | 0.07 |
Grand average of hydropathy | 0.175 |
Instability index | 46.18 |
Isoelectric point | 6.29 |
Molecular weight | 124054.95 |
Publications | PubMed=26259924
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Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11634
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 162.28| 55| 116| 615| 678| 1
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615- 678 (82.87/72.80) GTPFHQIVEGLLNM..MFRKInrGNQTTITVPsgsssSSGPVNEdASIG.......PM.LPAWDILeAIPFVVD
732- 796 (79.41/46.24) GTDWPSPAANLLNVeeQIKKI..LAETGVVVP.....SLAPVVA.ISTGdsspatlPLpLAAFTSL.TITYKVD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 139.89| 43| 116| 167| 214| 2
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167- 214 (67.78/57.21) KTLRAINGTSWHDTFlglwFASLRLVQRERDpIEGPMPHLDTRLCM...LL
286- 331 (72.11/44.66) KAMLFISGITVGSAY....FDCLAMTEMPVD.CSGNMRHLIVEACIarnLL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 105.65| 33| 281| 104| 137| 3
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104- 137 (55.30/45.27) SKTNSQQKFHKVMAF.......EYLSSSASLChGASHSALW
380- 419 (50.35/35.12) SPATSLAELEKIFEFaiagsedEKISAATILC.GASLIRGW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 81.98| 25| 712| 343| 374| 6
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343- 374 (34.43/35.85) NGHINQrpQCMPAPvpgWSSFMKGepLTSVLV
1064- 1088 (47.55/24.66) DGNISL..GCDPAT...WRAYVSG..FVSLMV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.06| 12| 710| 85| 96| 7
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85- 96 (21.35/11.65) SPEALLHLTSDT
798- 809 (21.71/11.96) SSERFLHLAGQT
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 124.07| 38| 281| 243| 282| 8
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243- 282 (59.15/40.97) WKEKRVP...GKCRNDLVSSlQVLGDYQsLLTPPQSVITAANQ
525- 565 (64.92/36.81) WRFNRPPldhGIGDVPTVGS.QLTPEYL.LLVRNSHLMSAGNN
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