<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11600

Description Heat shock protein 70 family
SequenceMLTKDKALWFLFLFLSEFLLGIAVAAEEPKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAALNAERTIFDVKRLIGRNFNDPEVQRDMKFLPFKIVNKDGKPYIQVKVKDEIKVFSPEEISAMILTKMKETAEAYLGKKIKDAVITVPAYFNDAQRQATKDAGTIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVYDLGGGTFDVSILTIDNGVFEVLATSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSESLTRARFEELNMDLFKKTLAPVKRALEDANLKKSDIHEIVLVGGSTRIPKVQQLLKDLFDGKEPSKGINPDEAVVYGAAVQGGILSGEGGEGTNDILLLDVAPLSLGIETAGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIRVFEGERSLTKDCRELGKFDLTGIPPAPRGVPQIEVTFEVDANGILHVTAEDKAAKKSKSITITNDKGRLSQEEIDRMVQEAEEFAEEDRKVREKIDSRNKLESYIYSMRSTIDDKDKLADKIDSDDKEKIETTLKEALEWLDDNQNGEKEDFDEKLKEVEAVCNPVIKQVYEKSGGSSAGSQEEDEPTDEL
Length659
PositionUnknown
OrganismCorchorus olitorius
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Grewioideae> Apeibeae> Corchorus.
Aromaticity0.07
Grand average of hydropathy-0.420
Instability index31.92
Isoelectric point5.09
Molecular weight73132.14
Publications









Function






Annotated function


GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11600
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.16|      25|      26|     558|     582|       1
---------------------------------------------------------------------------
  558-  582 (41.85/24.45)	KVREKIDS..RNKLESYIYSMRSTIDD
  585-  611 (35.31/19.59)	KLADKIDSddKEKIETTLKEALEWLDD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.15|      20|      22|     103|     122|       2
---------------------------------------------------------------------------
  103-  122 (36.92/22.75)	GRNFNDPEVQRDMK.FLPFKI
  127-  147 (30.23/17.44)	GKPYIQVKVKDEIKvFSPEEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.06|      16|      16|     181|     196|       3
---------------------------------------------------------------------------
  181-  196 (27.61/19.39)	AQRQATKDAGTIA.GLN
  198-  214 (20.45/12.40)	ARIINEPTAAAIAyGLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.78|      21|      26|     400|     425|       6
---------------------------------------------------------------------------
  216-  239 (32.41/15.73)	KGGeknILVYDLGGGTFDVSILTI
  403-  423 (37.36/24.63)	QGG...ILSGEGGEGTNDILLLDV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11600 with Med37 domain of Kingdom Viridiplantae
Unable to open file!