<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11598

Description Uncharacterized protein
SequenceMGDGNNTSGRGISANNTSSSGNSEKPEWLQQYNLLGKIGEGTYGLVFLARIKSPTNRGKCIAIKKFKQSKDGDGVSPTAIREIMLLREISHENVVKLVNVHINHADMSLYLAFDYAEYDLYEIIRHHRDKVNHSINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGDEQGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEAKSTPNPFQLDQLDKIFKILGHPTLEKWPTLANLPHWQSDMQHIQAHKYDNAGLHSVVHLSPKSPAFDLLSKMLEYDPRKRITAAQALEHEYFRIEPMPGRNALVPSQPGEKIVNYPTRPVDQNTDFEGTTSIQPSQPVSGNAVAGNMGGAHAGRNGSVNRPMPPPPMQRMPQGMMAYNFQAQAGVGGGMNPGGISMQRNMAAAQAHQPQQLRRKDPGGMTGYPPQQKSRRL
Length481
PositionKinase
OrganismCorchorus olitorius
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Grewioideae> Apeibeae> Corchorus.
Aromaticity0.07
Grand average of hydropathy-0.463
Instability index38.03
Isoelectric point9.25
Molecular weight53401.37
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11598
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.19|      39|      42|     390|     430|       1
---------------------------------------------------------------------------
  390-  430 (75.19/35.32)	GnaVAGNM..GGAHAGRNGSVNRPMPPPPMQRM.PQGMMAYNFQ
  434-  475 (64.00/25.79)	G..VGGGMnpGGISMQRNMAAAQAHQPQQLRRKdPGGMTGYPPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.08|      28|      44|     170|     199|       2
---------------------------------------------------------------------------
  170-  199 (43.85/34.50)	LVMGEGDEQGVVKIADFGLarIYQA..PLKPL
  215-  244 (45.23/29.11)	LLLGAKHYTSAVDMWAVGC..IFAEllTLKPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.98|      24|      39|     321|     346|       3
---------------------------------------------------------------------------
  321-  346 (32.37/30.17)	KMLEYdPRKRITAAQALEHEyFRIEP
  361-  384 (42.60/27.61)	KIVNY.PTRPVDQNTDFEGT.TSIQP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.73|      30|     168|     119|     148|       4
---------------------------------------------------------------------------
  119-  148 (53.63/34.39)	DLYEIIRHHRDKVN.HSINQYTVKSLLWQLL
  289-  319 (50.10/31.70)	DMQHIQAHKYDNAGlHSVVHLSPKSPAFDLL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11598 with CDK8 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EPMPGRNALVPSQPGEKIVNYPTRPVDQNTDFEGTTSIQPSQPVSGNAVAGNMGGAHAGRNGSVNRPMPPPPMQRMPQGMMAYNFQAQAGVGGGMNPGGISMQRNMAAAQAHQPQQLRRKDPGGMTGYPPQQKSRRL
345
481










Molecular Recognition Features






MoRF SequenceStartStop




1) AAQAHQPQQLRRKDP
2) IAIKKF
3) TGYPPQQKSR
452
61
470
466
66
479