<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11569

Description Uncharacterized protein
SequenceMAELDYQAIRMSSGDFTRILASQGVKFLLSGEGKVPLTSLDHERRVWLFFSANWCRPCKSFIPELVQLYNNTLRTHGNKELEIVFISSDHNEDGFIDHFKTMPWLAVPFNSNLHKTLRETFQVVRIPTIFPLDSDGDGQPIAEDLIGLIQDYGQDAFPFTRKRKEELNAIDDSKRQGGKLEQLLGQNHLVSRDGGKILVSELVGKTIGLYFGAHWCPPCRTFTAHLVQVYKQLSISKGGCFEVILVSTDRDQKEFDVNISDMPWLALPFEDRTRQDLCRIFKIKAIPELVLIGPDGKTINTNGKSIISLYGAKGFPFTQSRITEVETTLKKEGDALPQQIHDKKHQHVLKLDMAKAYVLAIDKDKNSQNALKWASDHLLQKGQTVILIHVKIKPFSSHSSSPIPTPRLNQISDINGDLPLIQCKDVVLEETDVAKALVEYVTQAAIEVLVVGASTKTGFLRFKATDIPGMVSKGAPDFCSVYVISKGKISTMRSASRAAPAISPLLEKPRVHEAPRKSSDSMESFRSPFTRRGVNGKSYPDLPMPDTDISFVSSGRPSIDRIFPAFYDCQESSRTTPRLSNVSDVDSNASFESMLLGRRSLDINSPPNFSSVSQDSDRLSTSSSSMDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKVKEIIIICCTVSPDWKSSSQHTLTGYKILCIPSQARELQLWKLEEERRMEEARLAEEAALAIAEKEKAKSKAAMEAAEAAQRIAQLEAQKRVSAEMKALKESEEKRKALDALAHSDFRYRRYTIEEIEAATEFFSQHLKIGEGGYGPVYNGRLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMSNGSLDDRLFRRGNTPPLSWQLRFRIAAEIGTGLLFLHQTKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHHVERAIEKGMFPQMLDQSIPDWPVEEALIFANIALKCAELRRKDRPDLGKVVLPELNRLRTLAEETMHPTLLNGSPEHTSCPNSQDVLDP
Length1091
PositionTail
OrganismCorchorus olitorius
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Grewioideae> Apeibeae> Corchorus.
Aromaticity0.07
Grand average of hydropathy-0.313
Instability index44.32
Isoelectric point6.83
Molecular weight122191.71
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11569
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     381.81|     109|     158|      24|     180|       1
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   24-  134 (189.06/113.67)	GVKFLLSGE.GKVPLTSLdHERRVWLFFSANWCRPCKSFIPELVQLYNNtLRTHGNKELEIVFISSDHNEDGFIDHFKTMPWLAVPFNSNLHKTLRETFQVVRIPTIFPLDS
  185-  294 (192.75/174.86)	GQNHLVSRDgGKILVSEL.VGKTIGLYFGAHWCPPCRTFTAHLVQVYKQ.LSISKGGCFEVILVSTDRDQKEFDVNISDMPWLALPFEDRTRQDLCRIFKIKAIPELVLIGP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.86|      19|      19|     717|     735|       2
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  717-  735 (29.81/24.58)	EAALAIAEKEKAKS.KAAME
  738-  757 (27.05/21.51)	EAAQRIAQLEAQKRvSAEMK
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     137.86|      48|     346|     518|     585|       3
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  498-  561 (68.20/49.63)	AAPAISPLLEKPRVheAPR.....kssdsmesfrspftRRGVNGKSYPDLPMPDTDISFVSSGRPSIDR
  562-  628 (69.67/41.39)	IFPAFYDCQESSRT..TPRlsnvsdvdsnasfesmllgRRSLDINSPPNFSSVSQDSDRLSTSSSSMDD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.28|      23|     347|     673|     716|       4
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  629-  651 (39.32/43.80)	VEAEMRRL...KLELKQTMEMYSTAC
  691-  716 (31.96/19.07)	IPSQARELqlwKLEEERRMEEARLAE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     273.16|      83|     109|     856|     943|       5
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  856-  943 (139.47/93.28)	C...PEY...GCL.....VYefmSNGSLDDRLFrrGNTPPLSWQLRFRIAAEIGTGLLFLHQTKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPP
  962- 1055 (133.70/77.11)	CyidPEYqqtGMLgiksdIY...SLGIMLLQII..TAKPPMGLTHHVERAIEKGMFPQMLDQSIPDWPVEEALIFANIALKCAELRRKDRPDLGKVVLP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.07|      10|      19|     341|     350|       6
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  341-  350 (19.05/14.06)	HDKKHQHVLK
  363-  372 (17.02/11.73)	KDKNSQNALK
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     149.53|      44|     157|     137|     182|       7
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  137-  182 (73.08/61.82)	DGQPIAEDLIGLIQDYGQDAFPFTRKRKEELNAidDSKRQGGKLEQ
  295-  338 (76.45/57.46)	DGKTINTNGKSIISLYGAKGFPFTQSRITEVET..TLKKEGDALPQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11569 with Med32 domain of Kingdom Viridiplantae
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