<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11544

Description Uncharacterized protein
SequenceMSSSQFLKKLRVPPFILWFSAEITCPKTTVSLASPPLPPKSATAPPPTAPVSSTTAASSGELIEATPRINKFFAASSKEVAGANGNNVTAYGVAQCVETIDEKGCEECLKVAYGNIQRCPPEADGRAVDTGCFLRYSELPFFGANYTIDLKPYLKSKDSTKKKALIGGLVGGGGLLLLLSIFFVWFKVFRKDKAVLQDDVEGAPELQGPMTYTYKELTSATTNFSEENKLGEGGFGAVYKGVLKNGRVVAVKKLAISKSERVKTEFNTEVKLISNVHHRNLVRLIGCCSKGPELLLVYELMANGSLDKHLFGEGHGSLNWKQRFDIILGTAKGLAYLHEEFHVCIIHRDIKPGNILLNKDLQPKIADFGLVRLLPEDQTHVSTKFAGTLGYTAPEYALHGQLSEKVDTYSYGVVLLEIISGQKNTETSLDPTAEYLLKRAWGLYQDNMAMEIVDKSLDPSEYNKEDMKRIIEIAFLCTQSSAALRPTMSEVVALLKTLSSLEPRQPTRPAFIDSERRIVTEDNRSTSSGSNATNSITQVSEAMEELKNGYVSPSSSPPTPPSPLPISVGPGNQKYFFSPSPSPSPPFSPSPSNHASAENLPLLHHYNRPSAPLKQVTSAFSLDRKDPDELEDKSSSCLKDFAVAWYGKLNAIACASKTCARIPSSNVNPQFWIPIHIVVPERPTEFAVFNVIAESEQDKVQAPGRYKRPRALVSESWQASGEMLSSIDPEAMAVDRALVQSIQAYVDAVLDLASHLRCYARIWSSTIVPHLRIPGLNAPILYAAGFVYHPVGWGKSPVDEYFAERFFYWKIPRGVTDPKELEVLDLGYKNFSRPIPPELGSNLSLMIFWLDFLPFGAFSVKFSLLLLSLCSSLSLFLSVLVKERGMLKMEAATLNGISCGNEERGMIEIGAATSNGLWSTSVSSCVSCPRASQSVAVLRASLLRAVVLLVYLRVCRVREPRSRWPF
Length966
PositionTail
OrganismCorchorus capsularis (Jute)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Grewioideae> Apeibeae> Corchorus.
Aromaticity0.09
Grand average of hydropathy-0.112
Instability index47.34
Isoelectric point8.22
Molecular weight106078.54
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11544
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.93|      13|      25|     422|     435|       2
---------------------------------------------------------------------------
  422-  435 (20.71/15.04)	QKN.....TETSLDPTaEY
  445-  462 (19.22/ 9.00)	QDNmameiVDKSLDPS.EY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.07|      18|      23|     877|     899|       3
---------------------------------------------------------------------------
  882-  899 (34.78/27.84)	KERGMLKMEAATLNGI......SC
  902-  925 (28.29/11.34)	EERGMIEIGAATSNGLwstsvsSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.12|      16|      18|     779|     794|       4
---------------------------------------------------------------------------
  779-  794 (32.21/20.09)	PI..LYAAGFVYHPVGWG
  797-  814 (25.91/14.70)	PVdeYFAERFFYWKIPRG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.81|      17|      23|      91|     113|       5
---------------------------------------------------------------------------
   93-  109 (30.11/23.85)	VAQCVETIDEKGCE.ECL
  116-  133 (27.69/ 6.06)	IQRCPPEADGRAVDtGCF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.99|      16|      24|     703|     719|       6
---------------------------------------------------------------------------
  703-  719 (27.13/21.09)	PGRYKRPRALVsESWQA
  729-  744 (27.86/16.64)	PEAMAVDRALV.QSIQA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.44|      16|      18|     470|     487|       7
---------------------------------------------------------------------------
  470-  487 (24.28/19.49)	IIeiAFLCTQSSAALR.PT
  491-  507 (23.16/11.99)	VV..ALLKTLSSLEPRqPT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.37|      19|      23|     601|     620|       9
---------------------------------------------------------------------------
  601-  620 (29.88/16.94)	PLlHHYNRPSAPLKQVTSAF
  627-  645 (31.48/14.09)	PD.ELEDKSSSCLKDFAVAW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.35|      16|      27|     161|     176|      10
---------------------------------------------------------------------------
  161-  176 (26.57/18.42)	KKKALIGGLVGGGGLL
  191-  206 (26.78/18.63)	KDKAVLQDDVEGAPEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.83|      16|      97|     655|     674|      14
---------------------------------------------------------------------------
  659-  674 (34.78/23.04)	C.ARIPSSNVNPQFWIP
  758-  774 (29.05/10.35)	CyARIWSSTIVPHLRIP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11544 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RQPTRPAFIDSERRIVTEDNRSTSSGSNATNSITQVSEAMEELKNGYVSPSSSPPTPPSPLPISVGPGNQKY
504
575










Molecular Recognition Features






MoRF SequenceStartStop




NANANA