<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11526

Description Uncharacterized protein
SequenceMEEETPVATAVAIDRHKNSHLALKWAVDNLLYNNFGSQCFLVHVRCQNSLGFNCALLAFTENLEEEPLTEAELQKFFLPYRAYCARKGIQSNEVVLLDNDVSNALLDFIHNKNISSVVVGATSRNVLTRKLRNPDVPTSLLKFAPEFCSVYVIYKGKVQFSRLASGSEAPNDNASVNKSPYLKTFLSKLTFESPRSEELIRTVSIRQGSGYRSNSVRSTATFITDSFKVTPLEKLMKMDEIQLPTPSTGSQAPESPQRSSISEHSTFSGPISCRSTDVSGRNSACTEEDSNMFHPLHDLKQCKEDEMRKLREELKKTVEMYNTVSREADEAKKEARKLQEWKAAEERKLEEAKLCEEAARAVAAAERQKTKAAMEAAQMAQLIAEMEVQKRKLAELKAFREAEAKQRALDQLANNKAAYRKYTINEIEAATDHFTMSYKIGEGGYGPVFKGTLEYTDVAIKVLRPDISQGQKQFKQEVEVLSCMRHPHLVLLIGACPEYGSLVYEYMENGSLEDRLFRKDNTPSLPWKTRFKIAAEIGTGLLFLHQTRPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSFADSVTQYRLTAARGTFCYIDPEYQRTGMLGVKSDVYSLGVVLLQLITSRAPVGLAVHIQEAIENGTFADMLDPTVPDWPVEEALSLAKLALKCCELCKKDRPDLASVVLPELNRLRNLGMKNEANISEKVVHDEALNYHSEPQIESQGNQITLRSKWQRLKSMTRTWKASIFPPSRRPSGKWDKKALGVGCWSMTSCSGAPYDMKCARSFST
Length797
PositionTail
OrganismCorchorus capsularis (Jute)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Grewioideae> Apeibeae> Corchorus.
Aromaticity0.07
Grand average of hydropathy-0.421
Instability index45.21
Isoelectric point8.35
Molecular weight89516.26
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11526
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     112.71|      38|      73|     306|     348|       1
---------------------------------------------------------------------------
  307-  348 (57.35/50.77)	MR..KLREELKKTVEMYNtvsREADEAKKEA..............RKLQEWKAAeERK
  349-  398 (33.68/15.06)	LEeaKLCEEAARAVAAAE...RQKTKAAMEAaqmaqliaemevqkRKLAELKA.....
  400-  421 (21.68/ 8.25)	.....................REA.EAKQRA.............lDQLANNKAA.YRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.45|      25|      50|     489|     515|       2
---------------------------------------------------------------------------
  489-  515 (39.20/30.77)	LVLLIGACPEygSLVYEYMENGS.LEDR
  541-  566 (40.25/24.16)	LLFLHQTRPE..PLVHRDLKPANiLLDR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11526 with Med32 domain of Kingdom Viridiplantae
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