<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11513

Description Uncharacterized protein
SequenceMPHFSDESNVPTNTTAVAIDRDKNSPHAVRWAIDHLVITNPLIILIHVRLKNQGEGESDYDINQLFIPFRGYCARKGIQMKEVVLEDIDVSKALLDYISKNLINAVVLGASTRNAISRKFKHDIPTSLIKSAPEFCSVYVISKGKILTVRTAQRPVANTATPPRAPMISLDQTEDDRSPGSERLSFDNPARATPTRERDRLRNSPANLSLDSIEFGARGQSSGGNDSLSGDMDFPANLALGSMDISSQNLDFSMVSSSSSSESLSQSSRDVEAEMRRLKLELKQTMDMYSTACKEALNAKRKANELNQWKMEEARKFEEARLAEEAALQMAEIEKAKCKAAIEAAEAAQKLAEMEAQRRRHAELKAKKESEEKNRALTALAHNDVRYRKYTIEEIEEATEKFAESNKIGEGGYGPVYKGKLDHTPVAIKVLRPDAAQGQKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEHMSHGSLEDRLFRRGNTPPLSWRRRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADTVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSLGIMLLQIITAKSPMGLAHHVGRAIEKGTFSDMLDQAVPDWPVEEALSYAKLSIKCAELRKRDRPDLATVIVPELNRLRELGRSASESRSLGYCGGGHSSSGYSNSGQSRSRSLATSPLSRSRISSTSQV
Length720
PositionTail
OrganismCorchorus capsularis (Jute)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Malvales> Malvaceae> Grewioideae> Apeibeae> Corchorus.
Aromaticity0.06
Grand average of hydropathy-0.447
Instability index51.17
Isoelectric point8.31
Molecular weight79849.84
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11513
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     101.85|      26|      27|     184|     210|       1
---------------------------------------------------------------------------
  162-  184 (25.38/ 9.19)	....PPRA.PMISLDQTEDdrS...PGSERL
  185-  209 (39.48/29.26)	SFDNPARATPTRERDRLRN..S...PANLS.
  212-  240 (37.00/18.74)	SIEFGARGQSSGGNDSLSG..DmdfPANLAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.86|      20|      28|     310|     337|       2
---------------------------------------------------------------------------
  318-  337 (32.97/26.35)	EEARLAEEAALQMAEIE.........KAK
  339-  367 (24.89/ 6.09)	KAAIEAAEAAQKLAEMEaqrrrhaelKAK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.94|      46|     436|      84|     140|       3
---------------------------------------------------------------------------
   84-  140 (56.08/71.67)	VLEDIDVSKALLD..YISKnlINAVVLG....ASTRNAISRkfKHdiPTSlikSAPEFCsvYV
  521-  572 (72.86/50.56)	VHRDLKPANILLDrnYVSK..ISDVGLArlvpPSVADTVTQ..YH..MTS...AAGTFC..YI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11513 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AQRPVANTATPPRAPMISLDQTEDDRSPGSERLSFDNPARATPTRERDRLRNSPANLSLDSIEFGARGQSSGGNDSLSGDMDFP
2) LDFSMVSSSSSSESLSQSSRDVEAEMRRLKL
152
250
235
280










Molecular Recognition Features






MoRF SequenceStartStop




NANANA