<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11478
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MATATYPPPPPYYRLYKDYLQNPKSAPEPPPPIEGTYVCFGGNYTTDDVLPSLEDQGVRQLYPKGPNIDFKKELRSLNRELQLHILELADVLVERPSQYARRVEEISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQALEDIKRQLGGALLFVFDFRSVLVLAYLVPCFFLIHFFPVKNANSRRREEAQRLLKDHLGP |
Length | 203 |
Position | Middle |
Organism | Corchorus capsularis (Jute) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Malvales> Malvaceae> Grewioideae> Apeibeae> Corchorus.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.360 |
Instability index | 71.14 |
Isoelectric point | 9.20 |
Molecular weight | 23580.01 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11478
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.81| 10| 20| 7| 16| 1
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7- 16 (24.59/ 9.86) P.PPPPYYRLY
27- 37 (19.22/ 6.54) PePPPPIEGTY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 95.97| 25| 45| 74| 98| 2
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74- 98 (39.80/30.33) LRSLNRELQLHILELADVLVE.RPSQ
99- 124 (35.69/26.44) YARRVEEISLIFKNLHHLLNSlRPHQ
126- 142 (20.48/12.02) .....RATLIHILELQ...IQ.RRKQ
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