<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11466

Description Uncharacterized protein (Fragment)
SequenceESSTESSTESSTESSTESSTESSTESSTESSTESSTESSTESSTESSTESSAQSSAQSSAQSSTDSSTESSTVSSTESSTESSTESSTGSSAQSSTESSTESSTESSTESSTESSTESSTESSTESPTESSTESSTESSTESSTESSTESSTQSSTESSTQSSTESSTESSSSSSPSTMSSSESPYESSASSGCEFILGDVTIVPSSSSSQDPIYDVGQVKSIPCNSLNFIVSFDVQQTSDYYFAISSQAGLGITNEIVGTIGVISQTFILGESVYSFDDALPQDSMISVSIISTDDVLSISINGKVKLKILSKYYDYPQYLSAGPKKIYFGADVSGSIVTNIVASCLNNDGRCDALSSASSTESSSASSTESSSVSSTESSSVSSTESSSISSSISSTESSTESSSASSTESSTESSTESSTESSTESSTESSSASSTESSSASSTESSTESSSASSTESSSASSTESSSVSSTESSTESSSESSSESSSESSSESSSASSSESSTQSSSTVDFCNNSSVYSDFSVTSSPNNKMYNFNNPIILPCPGSDFIISFNVESDYDTYVAFTDLQGYYSSVGITETLIAYVSGTYTNFSGKKFLAPKRSTLNKRVSKFIMIKLTGQTLSFYVDGTLKFKTTKNKNIITQLYLTPFKGKVTYSNIISSCRLDNC
Length669
PositionKinase
OrganismSmittium culicis
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Zoopagomycota> Kickxellomycotina> Harpellomycetes> Harpellales> Legeriomycetaceae> Smittium.
Aromaticity0.06
Grand average of hydropathy-0.551
Instability index93.93
Isoelectric point4.05
Molecular weight69195.27
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11466
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            13|     457.13|      15|      15|       2|      16|       1
---------------------------------------------------------------------------
    2-   16 (36.66/ 7.96)	SSTESSTESSTESST
   18-   32 (36.66/ 7.96)	SSTESSTESSTESST
   34-   48 (36.66/ 7.96)	SSTESSTESSTESST
   66-   80 (34.46/ 6.96)	SSTESSTVSSTESST
   98-  112 (36.66/ 7.96)	SSTESSTESSTESST
  114-  128 (34.73/ 7.09)	SSTESSTESSTESPT
  130-  144 (36.66/ 7.96)	SSTESSTESSTESST
  146-  160 (35.54/ 7.45)	SSTESSTQSSTESST
  361-  375 (32.74/ 6.18)	SSTESSSASSTESSS
  377-  391 (32.57/ 6.10)	SSTESSSVSSTESSS
  409-  423 (36.66/ 7.96)	SSTESSTESSTESST
  457-  471 (32.74/ 6.18)	SSTESSSASSTESSS
  473-  487 (34.36/ 6.92)	SSTESSTESSSESSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.63|      16|      35|     240|     266|      10
---------------------------------------------------------------------------
  240-  255 (27.82/ 6.48)	SDYYF..AISSQAGLGIT
  274-  291 (19.80/15.23)	SVYSFddALPQDSMISVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     176.04|      45|     318|     177|     237|      12
---------------------------------------------------------------------------
  177-  237 (71.27/29.26)	STMSSSESPYESSassgcefilgdvtivpSSSSSQDPIYDVGQVKSIPCNSLNFIVSFDVQ
  497-  522 (39.46/11.05)	...SSSASSSESS................TQSSS........TVDF..CN......NSSVY
  523-  558 (65.31/25.01)	SDFSVTSSP.........................NNKMYNFNNPIILPCPGSDFIISFNVE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.84|      15|      16|     633|     648|      13
---------------------------------------------------------------------------
  633-  648 (21.91/19.80)	KFKTTKNkNIITQLYL
  652-  666 (26.93/18.85)	KGKVTYS.NIISSCRL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11466 with Med13 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ESSTESSTESSTESSTESSTESSTESSTESSTESSTESSTESSTESSTESSAQSSAQSSAQSSTDSSTESSTVSSTESSTESSTESSTGSSAQSSTESSTESSTESSTESSTESSTESSTESSTESPTESSTESSTESSTESSTESSTESSTQSSTESSTQSSTESSTESSSSSSPSTMSSSESPYESSAS
2) SSASSTESSSASSTESSSVSSTESSSVSSTESSSISSSISSTESSTESSSASSTESSTESSTESSTESSTESSTESSSASSTESSSASSTESSTESSSASSTESSSASSTESSSVSSTESSTESSSESSSESSSESSSESSSASSSESSTQS
1
358
191
509










Molecular Recognition Features






MoRF SequenceStartStop




1) PIYDVG
213
218