<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11379

Description Pkinase domain-containing protein/Usp domain-containing protein
SequenceMWLPRGNGTKKGIGNGLVAVAIDRDKGSQHALKWAAENLLSRGRTVILIHVVQKQPSGPYCYGQVCDFNASPHRHSEKQTKDLFLTFHCYCTRKDIQCLDVVLEDMDIVKALTEYASYAAIENLVLGASSRHGFIKKFKADHPSGVSKGAPDFCNVYVISKGKISSARKASRPAPYNSPLLDHIQSLNNNNDNLSDTSSKHSISFRDKVPVKPRSSIDEFSKSPLLRGRGQKGNSFADFSDTSTDISFVSSSRPSTDRTSSVLQDYIELSRTSRPSTSSDHSLGSIRLGPRFTDQNLHDFSYVSQESGRTSCSYSSQNLDEVETEMRRLKQELKQTMDLYSTACREAITAKQKATELQRWRLDEERRIGEARLAEECALSVAEKEKTKHKAAMETAEASKRMAELEARRRMITEMNALKEAEDVKTVLDSLAQKDIRYRRYTIEEIEEATEHFAQSRKIGEGGYGPVYRCHLDHTPVAVKVLRPDAAQGRSQFQQEIEVLSCIRHPHMVLLLGACPEYGILVYEYMANGSLDDRLFRRGNTPVLPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKVGDVGLARLVPAIAENVTQCRMTSTAGTFCYIDPEYQQTGMLGVKSDLYSLGILLLQVITAKPPMGLTHYVETSIEKGTFKETLDPAVPDWPVEEALSFAKLALKCAELRRKDRPDLGKVVLPELNKLREYAEENMNHMFLVGSARPSPNHSHVSVTQQEVMSAPESVTSTSSQTEKQSDPSQEG
Length775
PositionTail
OrganismCephalotus follicularis (Albany pitcher plant)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Oxalidales> Cephalotaceae> Cephalotus.
Aromaticity0.07
Grand average of hydropathy-0.505
Instability index51.28
Isoelectric point7.84
Molecular weight86684.22
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11379
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     180.62|      70|      79|     171|     246|       1
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  171-  214 (37.04/34.62)	.....................................SRPAP..YNSPLLDHIQsLNNNNDnlSDTSSKHSISfrdKVPVKPR
  215-  291 (108.49/66.25)	SSIDEFSKSPLLRGRGQKGNSFADFSDTSTDIsfvssSRPSTdrTSSVLQDYIE.LSRTSR..PSTSSDHSLG...SIRLGPR
  295-  326 (35.08/14.88)	QNLHDFSYVSQESGRTSCSYSSQNLDEVETEM...................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      99.47|      28|      92|     352|     379|       4
---------------------------------------------------------------------------
  352-  379 (47.46/36.08)	QKATELQ.RWRL.DE..........ERRIGEARLAE..ECAL
  400-  422 (15.92/ 6.63)	KRMAELEaRRRMiTE..........MNALKEAE.........
  433-  472 (36.09/25.46)	QKDIRYR.RYTI.EEieeatehfaqSRKIGEGGYGPvyRCHL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     193.72|      57|     166|     514|     570|       5
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  514-  570 (103.29/78.74)	ACPEYGILVYEYMANGSLDDRLFRRGNTP.....VLPWQLRFRIAAEIATGLLFL.HQTKPEP
  677-  739 (90.43/67.91)	AVPDWPVEEALSFAKLALKCAELRRKDRPdlgkvVLPELNKLREYAEENMNHMFLvGSARPSP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11379 with Med32 domain of Kingdom Viridiplantae
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