<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11371

Description Pkinase domain-containing protein/Usp domain-containing protein/U-box domain-containing protein
SequenceMENYDILEEEDELELPPPPALTVAIAINGNRKSKYVVRWALEKFVPEGNVVFKLFHVHDRITTVPTPMGNSIPLSEVREDVAAAYKKELGWQRSQMLLPYRNMCSQKKVRVDVTVIESDDIANAIAEEVAKYNINKLVIGASPRSIFSRKVSKGNMSSRISVCTPSFCTVYEVSKGKLSSIRPSDLESNGSTRDNSSDTSSAKSSTSFTSSLQTDFGSVASYSHFDSPSLPMQTFHALSTIDKTILHARTSSITCNHSRCQSLDIEKSKDVINSFPSSSDIGNAVSRSSSYRSLPIDSLSCISDQASVSDVLTDYSSSESQANMNFELEKLRIELRHVRGMYAIAQSETIDASRKLSNLNKCHSEEAIKLREIECKEEEAKELARQEKKKHEAARREAECVRYCAEREASQRREAEMKAARDAKEKEKLENALVGHVQKYQKFVWEEIVSATSSFSENLRIGSGAYGSVYKCSLHHTTAAVKVLHSDENHNSKQFQQELEILSSIRHPHLLILLGACPDHGCLVYEYMDNGSLEDRLFRLNNTPPIPWYARYQIAWEVASALVFLHNSKPKPIIHRDLKPANILLDQNLVSKIGDVGLSTMLHSDPSSMSAMFKDTAPVGTLCYIDPEYQRSGLLSPKSDAYAFGIVILQLLTAKPAIALTHLVETAIDDGELVKILDAEAGNWPIEETRELAMLGLSCAELRRKDRPDLEDQVLPALERIKGVADRARDSVCSVQPTPPNHFICPILKDVMNDPCVAADGYSYDRKAIKKWIEDNDNSPMTNLSLPNKNLLPNYTLLSAIMEWKSGKH
Length809
PositionTail
OrganismCephalotus follicularis (Albany pitcher plant)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Oxalidales> Cephalotaceae> Cephalotus.
Aromaticity0.06
Grand average of hydropathy-0.396
Instability index48.44
Isoelectric point6.07
Molecular weight90307.38
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11371
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.87|      35|      38|     241|     278|       1
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  241-  278 (52.05/45.91)	IDKTIlhARTS...SITCNHSRCQSlDIEKSKDVINSFPSS
  281-  318 (52.83/34.65)	IGNAV..SRSSsyrSLPIDSLSCIS.DQASVSDVLTDYSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.40|      14|      38|     132|     167|       2
---------------------------------------------------------------------------
  132-  166 (12.84/44.66)	YNinklvigasprsifsrkVSKGNMSSrisvCTPS
  171-  184 (26.56/ 9.71)	YE.................VSKGKLSS....IRPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      73.17|      17|     322|     366|     384|       4
---------------------------------------------------------------------------
  366-  382 (28.83/19.14)	EAIKLREIECK.EEEAKE
  392-  406 (21.57/10.09)	EAAR.REAECV.RYCAE.
  408-  425 (22.78/ 7.80)	EASQRREAEMKaARDAKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.65|      14|     485|     216|     238|       6
---------------------------------------------------------------------------
  201-  214 (23.23/12.22)	SAKSSTSFTS...SLQT
  218-  234 (21.42/22.22)	SVASYSHFDSpslPMQT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.83|      22|     137|     510|     533|      10
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  510-  533 (37.12/35.04)	LLILLGACP....DHgcLVYEYMDNGSL
  648-  673 (32.72/21.87)	ILQLLTAKPaialTH..LVETAIDDGEL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11371 with Med32 domain of Kingdom Viridiplantae
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