<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11365

Description Uncharacterized protein
SequenceMEEEEVWTWRWSEAERRSVLETVKKCQEREEYPLVWAMELATCNAGPQPRPTPSPELAHLLISHLLLGAKSNQGDKGQQGSLWKFVEQAISWGLLSPLQVLSLLTPSLIPNRRSLPEHYCLYLQLLSRYALSFDQHLLASLDDASKHLITLSVDNSLHLSLSYDGLPVLDIPLAFVFFFFTIVIALLDSTMHDWGLLMPTSLRSPFQSANPVEDIDDNHDAHTPAYNLSENERRQRLLRRNNSFMALEVLSKLTQCRKATVLLRLVHLNMPEKFNGLLQRLQFLEANKFTSPNLKSASQLLMGFSANVQRVVGFEYRLNKRQLIGMFIGVGSCRPLSSLDAKLNWSSCWIVFDIYMENAMNGRQLPLTSAILVLTECINTLRVFNQASWQDTFLALWISALRLVQRGRDPLEGPIPHLESRLCVLLSIVPLVISNLLEDEVLENFSVLLCPPASVIGAANSAAAKALSFISNPKNANDGLHSGSPGDTFFNAGGNMRHLIVEACIARNLIDMSAYFWPGYVCASFVSQPDVLQVQNSPWEKFMEGAPLNGPLINLLYTTPASSLAEIEKLYHIALNGSAEERPAAAKILCGASLSSGWNIQEHVVHFVVKLLSPPIPPGHTEPRSHLIDHMPMLSAILFGASSVDTVHQLSLYGVVPEVAASLMPLCETFGSLTPTSINKSSSDNEPSIYMVFSAAFLLLLRLWKFHGPPLEQFITGGTNGGELTLEYLLLLRNSRIGSPKSADRDETNSNLNQLEFAADKPIYIDYYPKLRVWCSQNKSCLVSTLSGLCSGNPVHQVADKILSMIYSKITKCGTSTIISSSSLSGSPACTGEDTYQRPMLPAWEVLEATPFVLEAILTACAHGRLSPRDLTTGLRDLVDFLPASVAAIITFFSAEVTRGTWKPVPMNGTDWPSPAALLPLVESEMKETLAAAGVNVPFSSSGLSPVLLPLPVAALVSLTITFKLSKNLEYIHAVVGPALESCASGCPSNSRPILAALWAQKVRRWHTFIVVSCCRSVFRQNEEAVAQLLRSCFTSFLGSTPVSKSLLTKEGNVNGLLGRIIPARGACPTIAPGLFYIRSCRTIHNVEHVNDLIVGLVAEYAWESAAKWKSSDCLRLKSNQASLSLATAKAREVAALGACLVCVTGGLPLVQELYRETIPTWLLSSREEKRGEVTAVARIMEGYTMAYMLVLSRSFLSGVGANPPSWAVSRKAPIIGDHLDFLARVLDGNISLGCDPVTWKAYVSCLVGLLVSCAPAWIKEVKLETLRRLARGFLGWHESEMALSLLERGGVAAMGSVSELLNVIN
Length1306
PositionTail
OrganismCephalotus follicularis (Albany pitcher plant)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Oxalidales> Cephalotaceae> Cephalotus.
Aromaticity0.08
Grand average of hydropathy0.142
Instability index49.42
Isoelectric point6.51
Molecular weight143292.11
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11365
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     362.45|     119|     153|     965|    1117|       1
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  965- 1103 (178.56/173.87)	LSKNLEYIHAVVGPALESCASgCPSNSRPILAALWAQKVRRWhtfiVVScCRSVFRQNEEAVAQL...........LRSCFTSFLGSTPVSKSLLTKE...GNVNGLLGRIIPAR...GACPTIAPGlfYIrSCrtihnvehvndLIVGLVA.EYAW
 1122- 1258 (183.89/106.28)	ASLSLATAKAREVAALGACLV.CVTGGLPLVQELYRETIPTW....LLS.SREEKRGEVTAVARImegytmaymlvLSRSFLSGVGANPPSWAVSRKApiiGDHLDFLARVLDGNislGCDPVTWKA..YV.SC...........LVGLLVScAPAW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.50|      12|     101|      92|     106|       3
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   92-  106 (19.54/18.32)	WGLLSPlqvLSLLTP
  194-  205 (25.96/15.05)	WGLLMP...TSLRSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     327.00|     102|     358|     439|     565|       4
---------------------------------------------------------------------------
  272-  375 (125.04/82.62)	EKFNGLL...............QRLQFLEANKFTSPNLKSASqllmgfsanvQRVVGFEYRLNKRQLIgmfigVGSC..RPLS..SLDA......KLnWS....................SCWivfDIY.MENA...MNGRQLPL..TSAILVLT
  443-  565 (165.13/169.25)	ENFSVLLcppasvigaansaaaKALSFISNPKNANDGLHSGS..........PGDTFFNAGGNMRHLI.....VEACIARNLI..DMSA......YF.WPGYVCA..SFVSQpdvlQVQNSPW...EKF.MEGA..PLNGPLINLlyTTPASSLA
  857-  921 (36.83/12.57)	...................................................................I.....LTACAHGRLSprDLTTglrdlvDF.LPASVAAiiTFFSA....EVTRGTW...KPVpMNGTdwPSPAALLPL..........
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.43|      26|     358|      36|      61|       5
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   36-   61 (49.63/30.25)	WAMELATCNAGPQPRPTPSPELAHLL
  397-  422 (46.80/28.06)	WISALRLVQRGRDPLEGPIPHLESRL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11365 with Med33 domain of Kingdom Viridiplantae
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