<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11355

Description Uncharacterized protein (Fragment)
SequenceKKKKSILTHVYHVGKKNGAKYLKLFDDPNQPTLKSSYISEHLAKIQEEDPSISLSQKMDPQQGVVTQDQSQQQQVVAVERLNQAVQQQLNLESLKTRAISLFKAISRILEDLEVYSHTNTTPKWQDILGQYSMVNLELFNIVDEIRKASKAFVVHPKNVNLQNAAILPVMLSSKLLPEMETEDSSKREQLLLGLQNLPITTQIDKLKARIDLIGAACESAEKVLADTRKAYFFGTRQGPPILPTLDKGQAAKIHEQESLLRSAVNYGEGLRMPGDQRQMTSAIPLHLVDVLTVGDGGHNFADGSGMYMKNTPPLSSNNISGQGTLLQASGSQLIGRSVASPAATSATSFDSTTPSPLPYANSPRSSTNLMNTLSPQQQTHQQQKQHQQQRQKMMQSPQQQLLAQQQFRQSQMQGLGQLHGQHQMQFSQPLGHQQFQARQMPSVQQGMGQSQLNQGNQLSRHISQFSSAANSALFNSGQGTPNTQMIPNMSVTMPSQSLLPRMQFGLTGNNPQRSSQILGDQMFNMGVSNPGGMMQPQQAQHGSQGAFSSMPQNAQNLQSGMVALQNVQQNHPNFAQQRQQNQQ
Length583
PositionHead
OrganismCephalotus follicularis (Albany pitcher plant)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Oxalidales> Cephalotaceae> Cephalotus.
Aromaticity0.05
Grand average of hydropathy-0.634
Instability index57.72
Isoelectric point9.52
Molecular weight64368.92
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11355
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      79.88|      15|      16|     381|     395|       1
---------------------------------------------------------------------------
  381-  395 (31.51/11.18)	QQQKQHQQQ.RQKMMQ
  398-  413 (22.96/ 6.23)	QQQLLAQQQfRQSQMQ
  569-  583 (25.41/ 7.65)	QNHPNFAQQ.RQQNQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     202.07|      30|      31|     417|     446|       2
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  417-  446 (54.87/24.02)	QLHGQHQM.....QFSQPLGHQQFQARQMPSVQQG
  451-  477 (26.76/ 7.64)	QLNQGNQLsrhisQFSSAANSALFNS........G
  478-  505 (37.74/14.04)	QGTPNTQM...ipNMSVTMPSQSL....LPRMQFG
  507-  532 (38.36/14.40)	..TGNNPQ.....RSSQILGDQMFN..MGVSNPGG
  533-  560 (44.34/17.88)	MMQPQQAQ.....HGSQGAFSSMPQNAQ..NLQSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.96|      11|      18|     345|     356|       4
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  345-  356 (15.96/13.40)	SATSFdSTTPSP
  365-  375 (20.00/11.25)	SSTNL.MNTLSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     233.79|      83|     113|      22|     111|       5
---------------------------------------------------------------------------
   22-  111 (114.44/67.11)	LKLFD..DPNQPTLKSSYISEHLAKIQEED..PsISLSQKMDPQqgVVTQDQSQQQQVVaVERLNQAVQQQlnLESLKTRaISLFKA....ISRILED
  136-  226 (119.35/52.41)	LELFNivDEIRKASKAFVVHPKNVNLQNAAilP.VMLSSKLLPE..METEDSSKREQLL.LGLQNLPITTQ..IDKLKAR.IDLIGAacesAEKVLAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.94|      24|      26|     279|     304|       6
---------------------------------------------------------------------------
  279-  304 (37.41/25.46)	MTSAIPLHLVDVltVGDGGHNFADGS
  308-  331 (40.52/21.99)	MKNTPPLSSNNI..SGQGTLLQASGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.21|      18|      32|     228|     249|       7
---------------------------------------------------------------------------
  228-  249 (22.09/28.60)	RKAYFFGtrQGPPiLPTlDKGQ
  261-  278 (34.13/21.54)	RSAVNYG..EGLR.MPG.DQRQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11355 with Med8 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GSQLIGRSVASPAATSATSFDSTTPSPLPYANSPRSSTNLMNTLSPQQQTHQQQKQHQQQRQKMMQSPQQQLLAQQQFRQSQMQGLGQLHGQHQMQFSQPLGHQQFQARQMPSVQQGMGQSQLNQGNQLSRHISQFSSAANSALFNSGQGTPNTQMIPNMSVTMPSQSLLPRMQFGLTGNNPQRSSQILGDQMFNMGVSNPGGMMQPQQAQHGSQGAFSSMPQNAQNLQSGMVALQNVQQNHPNFAQQRQQNQQ
330
583










Molecular Recognition Features






MoRF SequenceStartStop




1) KKKKSILTHVYHVGKKNGAKYLKLFDD
1
27