<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11347

Description Uncharacterized protein
SequenceMVVVSVQQQTGLIWESVIEQTKVAQEKGSDPLLWALQLSARLSSADVLLPSVELANVLVSYICWDNNVPILWKFLEKALVLEIVPPLLLLALLSHRVVPSRRSRPAAYRLYMELLKRHAFTLNSQINGPNYLKVMKSIDAVLHLSQNFGLQASEPGIIVVEFIFSIVWQLLDSSLDDEGLLELTPEGKSNWAIKPQEMEIDGHDNYDSKMTKYHERLQNMNTVMAIEMIGQFLQNNVTSKILYLARRNLHTHWIDFMENLRLLGEHSLALKDSKILTSEALQQLISDTRIVLSQECKTSSLQKFHTVMAFGSLASSAGLCHGASISALWLPLDLILEDAMDGYQVNSTSAIEIISGLIKALQAINGTTWHDTFLGLWIAALRLVQRERDPIEGPMPRLDPRLSMLLSITTLVVADLIEEEENAPAYETEFGSTNHWKEKKVSGKLRNDLVSSLQVLGDYQGLLTPPQSVVSAANRAAAKAMLFVSGINVGSAYFECINMEDMPINCSGNMHHLIVEACIARNILDTSAYYWPGYVNGRINQIPNSVPAQAPSWSLLMKGAPLTPTMVNALVLSPASSLSEIEKIFEIAVKGSEDEKISAATILCGASLIRGWNIQEHSVYLITRLLSPPAPTDYVEGNSHLINYAPMLNLLIVGIAPVDCVQIFSLHGFVPQLACSLMPICEVFGSCVPNVSWTLPTGEEISAHAVFSNAFALLLKLWRFNHPPIEHGVGDVPTVGSQLTPEYLLLVRNSHLISAENVHKDRNKRRLSEVAKLSSQQPVFVDSFPKLKVWYRQHQRCIAATLSDLVQGTPVHQTVNVLLNMMFRKINRGNQSLTIVTSGSSSSSEDTSLRPKLPAWDILEAVPYVVDAALTACAHGRLSPRELATGLKDLSDFLPASLATIASYFSAEVSRGVWKPVFMNGIDWPSPAANLSNVEEHIKKILAATGVDIPSLAAGGSSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWFDFLVFSASRTVFLHNTDAVVQLLKSCFTVTLGLNSMPVFCNGGVGALLGHGFGSHVCGGISPVAPGFLYLRVYRSIRGPVFLTEEVVSLLMHTVKEIACNGLPGETLEKLKASKNGMRYGQVSLAAAMTRVKSAASLAASIVWLSGGLVVVQSLFIETLPSWFISVHRSGQEQGSEGMIAMLRGYGLAYFAVLCGAFAWGVDSSSSASKRRPEVIRIHMEFLSSALDEKISLGCDWATWRAYVSGFVSLMVGCMAAWVLEADVDVLRRLSKGLRQWNEEELALALLGVGVNTMGAAAELIIEKEL
Length1325
PositionTail
OrganismCephalotus follicularis (Albany pitcher plant)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Oxalidales> Cephalotaceae> Cephalotus.
Aromaticity0.08
Grand average of hydropathy0.203
Instability index45.32
Isoelectric point6.13
Molecular weight145045.37
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11347
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.86|      24|      41|    1057|    1080|       1
---------------------------------------------------------------------------
 1057- 1080 (47.48/30.36)	PVFCNGGVGALLGHGFGSHVCGGI
 1099- 1122 (42.38/26.31)	PVFLTEEVVSLLMHTVKEIACNGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.78|      26|     160|     995|    1020|       2
---------------------------------------------------------------------------
  995- 1020 (54.30/30.31)	SLAAGCPW..PCMPIVASLWTQKAKRWF
 1156- 1183 (42.48/22.14)	SLAASIVWlsGGLVVVQSLFIETLPSWF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.59|      44|      82|     534|     585|       5
---------------------------------------------------------------------------
  534-  585 (62.55/59.13)	YVNGRINQIPnsVPAQ.APSWSLLMKGAPltptMVNALVLSPASslSEIEKIF
  620-  664 (74.04/45.99)	YLITRLLSPP..APTDyVEGNSHLINYAP....MLNLLIVGIAP..VDCVQIF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.65|      19|     163|     719|     742|       6
---------------------------------------------------------------------------
  679-  704 (24.50/15.27)	PICEVFGScVPNVswtlptGEEISAH
  724-  742 (35.15/17.95)	PIEHGVGD.VPTV......GSQLTPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.72|      14|     607|     602|     618|       9
---------------------------------------------------------------------------
  602-  618 (23.34/21.83)	ILCGASlirGWNIQEHS
 1212- 1225 (27.38/16.34)	VLCGAF...AWGVDSSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     330.52|     112|     361|      11|     139|      10
---------------------------------------------------------------------------
   11-  139 (159.70/168.58)	GLiWesvIEQTKVAQEKgSDPLLWAL.QLSARLSsadVLLPSVELanVLVSYICWDNNVPIL.........WKflEK....ALVLEIVPPLLLLALLSHRVVPSRRSRPAAYRLYMEllkrhAFTLNSQIN.GPNYLKVMKSID
  375-  501 (170.82/125.97)	GL.W...IAALRLVQRE.RDPIEGPMpRLDPRLS...MLLSITTL..VVADLIEEEENAPAYetefgstnhWK..EKkvsgKLRNDLVSSLQVLGDYQGLLTPPQSVVSAANRAAAK.....AMLFVSGINvGSAYFECINMED
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11347 with Med33 domain of Kingdom Viridiplantae
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