<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11338
Description |
Transcription elongation factor (TFIIS) family protein |
Sequence | MDLDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFGGGGNVTEAAIGRVNNGRVHEETEEEDEEGVTAAAEEEVREKSVNVEDDDDFDPFAGLFDDEQKSIVEIKEKLEDPDLSEESLVELLQNLEDMDITFQALQETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFNQPGDLEPPSLIADEDSPVQKALHNGSRQQVPDFGYSPVPQNGYSSSSKNSNITEPERKPRPVAPQPRRESPSPAKPSRPSPSQQTIPRDKEHKEVDFDTARKRLQQNYRQAENGFKTRHLLVQTSLYSVWSFSDCCSMYLF |
Length | 344 |
Position | Unknown |
Organism | Arabidopsis thaliana (Mouse-ear cress) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.902 |
Instability index | 63.78 |
Isoelectric point | 4.83 |
Molecular weight | 39202.82 |
Publications | PubMed=11130714
PubMed=18433157
PubMed=19245862
PubMed=19376835
PubMed=27862469
|
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
|
GO - Biological Function | translation elongation factor activity GO:0003746 IEA:UniProtKB-KW
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP11338
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.22| 16| 21| 97| 115| 1
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97- 115 (19.00/19.11) EEEvrEKSVnVEDDDDF.DP
121- 137 (19.22/ 8.21) DDE..QKSI.VEIKEKLeDP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 117.08| 33| 62| 204| 236| 2
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204- 236 (57.83/34.94) QPGDLEPPSLIADEDSPVQKALHNGSRQQVPDF
268- 300 (59.25/35.97) QPRRESPSPAKPSRPSPSQQTIPRDKEHKEVDF
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