<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11337

Description Protein kinase family protein
SequenceMTMMASPYSSDDIHSPVNSTVVAIDKEKHSSYAVRWAVDHLLNMIHNPVMILVHVRTKNSNHGANLNNDDLNQLFIPYRGYCARKGISMTEVVLDDSDVAKTILDYVNNNLVNNLVLGASTKNTFARSFMFSKPHEVQSSIMKSTPDFCSVYVISKGGKVQSSRPAQRPITNTLAPPRVPSSGFLIQSLSDSEQDLIPRVQRSARNKPNETTYPHNRAAFNTTQKGYKSPINGSMDFNNGFNQAAFQRNPTLQSSFSDESDGGFGVMGSVDLSSQNSMDFYHGASSSSEESIPQSTKDIEAEMRRLKLELKQTMDMYSSACKEALTAKRKANELNQWKIEEARKFEKARLSEEAALAVAEIEKAKCRTAVEAAEKAQRMAELEGQRRKQAEMKAVSEEKDKDRAVSALAHNDVRYRKYSIEEIEEATERFANHRKIGEGGYGPVYNGELDHTPVAIKVLRPDAAQGKKQFQQEVEVLCSIRHPHMVLLLGACPEYGCLVYEFMENGSLEDRLFRTGNSPPLSWRKRFEIAAEIATALSFLHQAKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPASIADSVTQFHMTSAAGTFCYIDPEYQQTGMLTTKSDVYSLGILLLQIITGRPPMGLAHQVSRAISKGTFKEMLDPVVPDWPVQEAQSFATLALKCAELRKRDRPDLGKEVVPHLIRLKNFGNDGDERTNEWI
Length711
PositionTail
OrganismArabidopsis thaliana (Mouse-ear cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.07
Grand average of hydropathy-0.482
Instability index42.11
Isoelectric point7.30
Molecular weight79413.13
Publications
PubMed=11130714
PubMed=27862469

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11337
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.50|      36|      48|     321|     367|       1
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  323-  367 (45.31/48.72)	EALTAKRKANELNQwkieearkFEKARLSEEAALAVAEiEKAKCR
  368-  403 (58.19/31.14)	TAVEAAEKAQRMAE........LEGQRRKQAEMKAVSE.EKDKDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.00|      16|      21|     125|     140|       2
---------------------------------------------------------------------------
  125-  140 (30.66/17.38)	FARSFMFSKPHEVQSS
  148-  163 (28.48/15.70)	FCSVYVISKGGKVQSS
  174-  182 (16.85/ 6.71)	LA.......PPRVPSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     134.82|      30|      49|     630|     659|       3
---------------------------------------------------------------------------
  578-  607 (33.46/20.49)	..PASIADSVTQfhmTSAAGTF.CYIDPEYQQT
  630-  659 (53.56/37.31)	RPPMGLAHQVSR...AISKGTFKEMLDPVVPDW
  682-  710 (47.80/32.49)	RPDLG.KEVVPH...LIRLKNFGNDGDERTNEW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.06|      19|      40|     234|     254|       4
---------------------------------------------------------------------------
  234-  254 (33.08/30.92)	SMDFNNGFNQAAFQRNPtlQS
  277-  295 (33.98/24.20)	SMDFYHGASSSSEESIP..QS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.01|      13|      27|      66|      78|       7
---------------------------------------------------------------------------
   66-   78 (23.49/18.16)	LNNDDLNQLFIPY
   94-  106 (19.52/13.77)	LDDSDVAKTILDY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11337 with Med32 domain of Kingdom Viridiplantae
Unable to open file!