<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11336
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MRTDCFMARIMATATYPPPPPYYRLYKDFSENTDSAPEPPPPIEGTYVCFGGNYTTEDVLPSLEEQGVPQLYPKDSNLDYKKELRSLNRELQLHILELADVLVDRPSQYAKRIGEISSIFKNLHHLLNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQGLLKDAFVTLDGQ |
Length | 178 |
Position | Middle |
Organism | Arabidopsis thaliana (Mouse-ear cress) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.607 |
Instability index | 69.62 |
Isoelectric point | 5.97 |
Molecular weight | 20524.15 |
Publications | PubMed=11130714
PubMed=27862469
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11336
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 127.57| 41| 44| 58| 98| 1
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58- 98 (69.88/38.15) DVL...PSLEEQGVPQLYPKDSNLDY.KKELRSLN.RELQLHILEL
100- 145 (57.68/30.57) DVLvdrPSQYAKRIGEISSIFKNLHHlLNSLRPHQaRATLIHIMEL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.84| 16| 19| 17| 32| 2
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17- 32 (35.25/18.84) P.PPPPYYRLYKDFSEN
37- 53 (31.59/16.30) PePPPPIEGTYVCFGGN
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