<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11305

Description "Bm2382, isoform e"
SequenceMQQQHPAAASNSGLSVAVPTVEPTTVTVVDRLKHQLLQAYDNGDTKQATDVIIKLEKSNLTKELLEMTRVGAVVNDIRKKVAQSAPELSKRCRTLIKCWQKLAEPKPTSSGSSSANGTPSYASPAVKKGLTPGTPARGPRVISGGSPRLTPAEKSRFTALPSSVPTPSESSGSWNTDASPTFSNGRTVTPYQRSEQKMSANIVANTWKSHAVSADLTIKAVENSLLSDDRVIRNGKRKGGDIATSDIGATNGLSATKRLHYTSASVSPTAPHQSLLAARRADVKSTSELVAQLTENLPGYLTINISQNHRLTGSEHGDNEGQANMDTGHISRTPILFIQTEASKKKEKRGRSKKNKEKEGRIKDQFVANEKVIAVDNEKASTSAMGNADSVPVFNVANSVPSTDKMVVPTRNGKYDWYAMLPSLETLRNREHFRSKPSSNQRKSYIVNVLGREVTFFLPKVSPSHVLLSKPRIASSDRYPLQVLALPYIDVGLPDFLEYQYPKPERFYAEENFMYGASRPN
Length521
PositionUnknown
OrganismBrugia malayi (Filarial nematode worm)
KingdomMetazoa
Lineage
Aromaticity0.06
Grand average of hydropathy-0.586
Instability index42.55
Isoelectric point9.75
Molecular weight56853.48
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats
>MDP11305
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     116.27|      26|      26|     107|     132|       1
---------------------------------------------------------------------------
  105-  131 (42.76/20.76)	P..kPTSSGSSSANGTPSYASPAVKKG..LT
  132-  158 (38.14/17.75)	P.gtPARGPRVISGGSPRL.TPAEKSR..FT
  161-  189 (35.37/15.95)	PssvPTPSESSGSWNTD..ASPTFSNGrtVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.32|      30|      49|     201|     230|       2
---------------------------------------------------------------------------
  194-  226 (43.21/26.01)	SEQK.................msaNIVANTWKSHAVSADLTIKAVENSLL
  227-  276 (39.11/22.91)	SDDRvirngkrkggdiatsdigatNGLSATKRLHYTSASVSPTAPHQSLL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11305 with Med26 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AEPKPTSSGSSSANGTPSYASPAVKKGLTPGTPARGPRVISGGSPRLTPAEKSRFTALPSSVPTPSESSGSWNTDASPTFSNGRTVTPYQRSEQKMSANIVA
2) NISQNHRLTGSEHGDNEGQANMDTGHISRTPILFIQTEASKKKEKRGRSKKNKEKEGRIK
103
304
204
363










Molecular Recognition Features






MoRF SequenceStartStop




NANANA