<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11297
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MEQAVNGLVMNGTTSHLPLPLQNGDLVLHEPSPEELERELPVVTDGQVPLGELTSRLVQAMYAELTEFAETMPTMSDAARKRSLADWVVKFKRQVVKLYAIAKWSRDASVVQKAMNITAFLMDQNGQFEEAIMGLKYGKESLDPARLRNHDLLTSLDVLTTGTYRRLPSCIKELIIPPVPLTDEEVAKTLADIEDAMRYRLRTSEIVPWELSQYRIADGRVWFTAPKLFEASLCLQGAGKTDGWFFVNVTFLFKVGGDLTGMQDFPRTPTGVLKRNITDEADARLAFYLPPEAPPPPGVEAPPRPELPEGVVDAPLVRVFNFLQMMSLSYQLEILWYQAEHMRSLGWADYLKVEMTNNRQKMVVSYWLWKPLPGQQASSQARNRAPQLGGKLSISITRVKEKTGRQAMRSPKARVLAELQERSKLERARPSDEVEHLRFDVQWEPAQGTLGVNIGPEDAYIPPEQLAIDPNDLDFEGLLRRVIRRHTEGIMKYFQRDLMQNAHTRNVFSAPGEVTFVTNEGTPSLRVHLCADEVVIVTVDPRTGRLTLCDTGDLAAAGRGPRFAAISDRLNDSPQRLPEALIRLRLSTITDLAEQKVQYVGLQSFRERNFLPEEIAKLGPDARGKLYIQLANFTSHYLVLVITDNDYRYALINVKVQRDTMYNNLIMEDIGWLDIHRLHTGDMVVEPGHGPEPVVGQKRKRDDRDEVPVVPAAPAEQNPTSFRLETKVLRELYAYCCARVAYTKVEQQFKLRQIPYTHVNSTASIGALDAAHIQSSLARSIPALCVLSRDILSGAPAEEAAMPNIRVIPLNWWSNDQAKVVTCVKLKYVQQPIGKRASGTSVIRPSKRIVYDTREAIVSFLSDDVDKCVDEFLEEWARVSKMVVIAREVAQMSTKHLWTDVRLLSFDLQTVEFAYAADYTLSLTCTDQLTSTGGSYHLRFGRVEHDDEMEVDGEPLRTTHNPHEDVEPYMRNLLRHGPLTSTLHRLVSLLRETLPIVAELEEIRAAAARSGVVVDTFAKSAGWFRILYGDLRHALDFRLMAGARVVILDGSHSLFDDSADGHTLRRLSGPSKAFASRDREPTAALQPIPDFRALVQDAIKGAVARGVAGQFAPIDIGVICDVSAVRVVGRLLYERVLEKLAAQAGPHL |
Length | 1148 |
Position | Tail |
Organism | Trametes pubescens (White-rot fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes>
Polyporales> Polyporaceae> Trametes.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.234 |
Instability index | 41.90 |
Isoelectric point | 6.15 |
Molecular weight | 128730.94 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11297
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 102.00| 34| 35| 568| 602| 1
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568- 602 (50.86/46.00) DRLNDsPQRLPEALIRL....RLSTITDLAEQKVQYVGL
603- 640 (51.15/40.46) QSFRE.RNFLPEEIAKLgpdaRGKLYIQLANFTSHYLVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 501.97| 188| 284| 649| 852| 2
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176- 321 (182.52/119.93) ...............................................................IPPVPLTDEEVAKTladiedamRYRLRTSeiVPWELSQY...RIADGRV..WF...TAPKLF...EASLCLQGAGKTDGWFFVNVTFLFKVGGD.LTGM.QDFPRTPT.GVLKRNITDEADARLAFYLP.PEAPPPPGVEAPprpelPEGVVdAPLVR.VFN
322- 386 (37.40/13.03) FlQMMSLSYQLEILwYQAEHMRSLGWadyLKVEMTNNRQKMVVSYWLWKPLPGQQASSQARNRAP................................................................................................................................................................
649- 852 (282.05/241.53) Y.ALINVKVQRDTM.YNNLIMEDIGW...LDIHRLHTGDMVVEPGHGPEPVVGQKRKRDDRDEVPVVPAAPAEQNPT........SFRLETK..VLRELYAYccaRVAYTKVeqQFklrQIPYTHvnsTASIGALDAAHIQSSLARSIPALCVLSRDiLSGApAEEAAMPNiRVIPLNWWSNDQAKVVTCVKlKYVQQPIGKRAS.....GTSVI.RPSKRiVYD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 97.23| 20| 527| 14| 33| 4
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14- 33 (35.23/20.15) TSHLPLPLQNGDLVLHEPSP
522- 541 (30.85/16.74) TPSLRVHLCADEVVIVTVDP
543- 561 (31.16/16.98) TGRLTLC.DTGDLAAAGRGP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 171.93| 55| 926| 34| 90| 5
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34- 90 (86.93/70.33) EELEREL.PVVTDGqvPLGELTSRLVQAMYAELTEFAETMPTMSDAARKRSLADWVVK
964- 1019 (85.01/61.97) EDVEPYMrNLLRHG..PLTSTLHRLVSLLRETLPIVAELEEIRAAAARSGVVVDTFAK
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