<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11277
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLMMEDGINVDDLFGEPASLELGLPSTTSTKGLAERLDEMRLLGCCQKIAWSKLGCIAYVAQDPSKVHVRYLQCQPTDGKWTLSDETPLLPVTEAHGGTALVHLSWNESGSELAVVDLSGRLSIYSIPIALNSVNGLRPPSFEPDDSAQIVGMLWLNTQRSVHAFYQAAKVQGRWAYSPYRRRPIGPFHPANKAALVYITRSGLIKLLYQNPDGKWAEISAELKNTSYSDRMLTHAALVATQTGILVATYSACQKICVYRVQINWNPPQYDPAQQPKQTPPQFPVPSFRFAHCKVETSCNVPGPARNNGDPSDNIHQPLPNSLYCLTRLDVILPTSDNAAGSSATPWIVATFSILPQIAPDHPHQQGPSSIIVRWQLESAPITLHPKFDEVTTKRNSMQMKAKAVLNRLDDIFCDRYVVSIDHIEYANVLAVTYDDSSISFYDPKTMAAFNGVDDANTVTSLAQAGFHYSPDTPGLHLSFSPSACAAVMLDSSGHVQLRVMEHSYGADNGLYDENKFSAAIASLTLAFCRGCGSEVNTDDILLILIRQLSSDAQTSFINEVYRALPINCNFTVEQDKLMNHPYIPRCLSIQAALGNKGKNHQRGFASSVSWFILQLRHASILYPFFFQYNKGIQAEPHDPDVLRMVLGNTKWALDFSLYILHELFNLADEFEDVSSDQEAFNQKLKTTNSLSLIILLSSMSRAFLRFICRGLRGIHAGYANAPLTGDARVYYAEICQAVETSPAAIDVYEKFLAGVDSAVRHAYHGAGFGDAERPGPEKELLVSARIPPVLVTAVSTILRQTIPSLRSDVNRMDIYMRDYSWLGVDSDRRTELYRRTRGLDIIKKIPIRLTPATNGAAQPSPGETKSKDGNAATGVAAGQPLRRRCVRCCEVSEGSYPPRSVLAFRMIFKLGHLRACICCGMWILESGSGSSEVGKPMGA |
Length | 941 |
Position | Tail |
Organism | Aspergillus aculeatus ATCC 16872 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus>
Aspergillus subgen. Circumdati.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.155 |
Instability index | 41.00 |
Isoelectric point | 6.68 |
Molecular weight | 103732.08 |
Publications | PubMed=28196534
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP11277
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 44.95| 16| 205| 47| 77| 1
---------------------------------------------------------------------------
47- 77 (17.15/44.58) CQKIawsklgCIaYVAQ........DPSKvhvrylqcQP
254- 277 (27.79/14.81) CQKI......CV.YRVQinwnppqyDPAQ........QP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 107.15| 33| 40| 139| 177| 2
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139- 177 (49.68/51.14) RP..PsFEPDDSAQIVgmlWLNTQRSVHAFYQAAkvQGRWA
184- 218 (57.47/37.48) RPigP.FHPANKAALV...YITRSGLIKLLYQNP..DGKWA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 135.86| 44| 300| 427| 476| 3
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427- 476 (61.04/62.74) YANV.LAVTYDDSSISFYDpKTMAafnGVDDAnTVTSLAQAGFHySPDTPG
733- 777 (74.82/49.37) YAEIcQAVETSPAAIDVYE.KFLA...GVDSA.VRHAYHGAGFG.DAERPG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.78| 35| 371| 104| 138| 4
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104- 138 (58.87/45.03) HLSWNESGSELAVVDLSGRLSIYSIPIALNSVNGL
478- 512 (61.91/47.79) HLSFSPSACAAVMLDSSGHVQLRVMEHSYGADNGL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.77| 17| 177| 516| 532| 6
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516- 532 (31.28/18.09) NKFSAAI..ASLTLAF....CRG
690- 712 (21.49/10.41) NSLSLIIllSSMSRAFlrfiCRG
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