<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11272

Description Uncharacterized protein
SequenceMSPTMQPSTPTTPTHRILMLHGHGQSGPFFRCKTRFLQETIEQAVRGAVQQQQQQQQQQQQQQQRQSGVVEFYYPSGLLPANPDNPLGDRKNNNMWAWGYGDHQSDRILGLEQSLQYIARLLETHGPFIGVMGFSTGAALAAITASLLERQRTVCDLPFDTTHPPLQFAVCFSGFRLEHPSYASIYQPRLTTPVLHVIGTLDTMVDPALSRRLVKACANASAHCFAGTHYVPRSRRFLETLAGFVDRALRTRPAGDGEDDDVWEDEDGV
Length269
PositionTail
OrganismAspergillus aculeatus ATCC 16872
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus> Aspergillus subgen. Circumdati.
Aromaticity0.09
Grand average of hydropathy-0.451
Instability index59.08
Isoelectric point6.35
Molecular weight30062.48
Publications
PubMed=28196534

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11272
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.45|      15|      37|     198|     212|       1
---------------------------------------------------------------------------
  198-  212 (26.86/18.63)	IGTLDTMVDPALSRR
  238-  252 (25.59/17.45)	LETLAGFVDRALRTR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.17|      16|      35|     124|     140|       2
---------------------------------------------------------------------------
  124-  140 (26.59/18.77)	THGPFIGVMGFStGAAL
  162-  177 (32.57/18.68)	THPPLQFAVCFS.GFRL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11272 with Med15 domain of Kingdom Fungi
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