<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11246

Description Uncharacterized protein
SequenceMASAPNPGQTLPRMPVVVPAMVPPPNGTEASTGGASNTDSDSEMQLVSSLAKLQKMEAMIHQLRTLLPERLLEPLAPIVNPKAAAGRSVPKSPQMLYEQLAQAARAGVSELQEFQSMWRSPEMKAVWDRMDAQIKENGGVMLQPTGKWERDYDTILADLREEEQTQNEQQQKANEEMERSKIQATEGGWRAIVESFAQKNVPGVRVLASQSEAAVTVVLVKAGMVFKVEAIAGQDGNGVPDWRVFTKTPGGQTPSKVETAVAQCLNSRPRQWDLLYLLDMISSYSTIKQTPCAKCAKMTDSTATLPTIRKPSSTPQESGSQTWTAYHQGCTE
Length332
PositionTail
OrganismAspergillus brasiliensis (strain CBS 101740 / IMI 381727 / IBT 21946)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
Aromaticity0.05
Grand average of hydropathy-0.476
Instability index54.29
Isoelectric point5.69
Molecular weight36298.88
Publications
PubMed=28196534

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11246
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.72|      16|      27|     227|     242|       1
---------------------------------------------------------------------------
  227-  242 (30.57/17.51)	KVEAIAGQDGNGVP.DW
  256-  272 (26.14/14.15)	KVETAVAQCLNSRPrQW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.09|      27|      28|      91|     118|       2
---------------------------------------------------------------------------
   91-  118 (43.18/30.68)	KSPQM..LYEQL.AQAARAGVSELQEfQSMW
  119-  148 (41.91/24.69)	RSPEMkaVWDRMdAQIKENGGVMLQP.TGKW
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11246 with Med27 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MASAPNPGQTLPRMPVVVPAMVPPPNGTEASTGGASNTDSDSEMQLVS
1
48










Molecular Recognition Features






MoRF SequenceStartStop




NANANA