<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11214

Description Uncharacterized protein
SequenceMTSVAAPAGTFLPGTKVHVGSHRVVVEKYLSEGGFAHVYVVRLPQPVDDVDTAVLKRVAVPDKMALANMRTEVETMKKLKGHRHIVTYIDSHASQLRGGGYEVFLLMEYCDGGGLIDFMNTRLQNRLTEPEILHIFDDVAEGVACMHYLKPPLLHRDLKVENVLISRASASVCYKLCDFGSAAPPRPAATTAAEGRLIEDDVQRHTTLQYRSPEMIDVYRKQPIDEKSDIWALGVLLYKLCYYTTPFEEVGQMAILNASFKFPPYPQFSDQLKLLIATMLKETPQKRPNIYEVLSQVCRMRGKEVPIRDIYAGRTTSEARRYQELPPSPVEAPRVGAVFSPPMQETRIIPEIAPMRRGRPSKPSSQQSSAKPSPSPYRGSTDPFAALDGHSTKGAATATTTTSVKTDEISARFPTLDQFSILHEKGDKFDFEPTLADSKATTEDEDLARRLTNALADDAFVKLSSPDSKPSVRDQPSVRESSSHRRPQTSPMETRDSPQQKWQQQQQTPLYQPVPQKPSMVSTGTMTSPPSTPKQPQPSLLSSRPIYRFPPSESTSSTAADHRASSQPQPSPRTSAEKIAGLSGSARPSLETSRPSTLDLLGTVDHDPVTRSKSANAAKVRPVSVHAGGMRERSREPDTTRSSIDVVRTTTAAAANYEGGAPLRHARTEIETERSQIVSDVDYLRAKEEEESNRKREKRYSSNGGVGGGAKHIKRTSLSNLSLAGTKTLFAGRFGEAFRRFESSGSGSDSNKARTPSPDETAVPARQPTPDMREGGVGSSGGNDLPMVEDETAEPEDDISPEMRRELERRRLSQEEKRVAQAAADYRRRVAAGGGGGGGGGGGAGMRSASIQNKVQSLLQDHSNKPPPPKTATGYGRYTEEAAVTSPSEANVVVAVSTGQRTGSRPAAPPKPKKLQAVNVNSVSTGNVNSVSTGNAGTPASVAPDSPDWETSFSRRFPSLSGLEMVEREIEIPIMIPLTKEQADFPDDLKEVIQHLFEIQSAVHGYLGPETQQELVRKIKNLTTSLATLTSHTNPSASDPNNNPHDPSPSLASIQLPPEIIDYVDASRNPDIYTREFVELVQRGNQDLKGKQAAFASFRDVLAREMRGAMPECTHEVNRAVEATGGVID
Length1129
PositionMiddle
OrganismPenicilliopsis zonata CBS 506.65
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicilliopsis.
Aromaticity0.05
Grand average of hydropathy-0.625
Instability index59.34
Isoelectric point7.37
Molecular weight123149.60
Publications
PubMed=28196534

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11214
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     174.95|      30|      30|     510|     539|       1
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  471-  499 (37.10/13.35)	SV..RDQ..PS.V.RESSSHRRPQTSpMETRDSPQ
  500-  530 (46.88/18.71)	QKWQQQQqtP..L.YQPVPQKPSMVS.TGTMTSPP
  531-  562 (39.38/14.60)	STPKQPQ..PSlLsSRPIYRFPPSES.TSSTAADH
  563-  585 (27.01/ 7.81)	RASSQPQ..PS.......PRTSAEKI.AGLSGS..
  586-  608 (24.58/ 6.47)	.....AR..PS.L.ETS...RPSTLDlLGTVDHDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.83|      14|      18|     301|     314|       3
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  301-  314 (24.97/15.05)	RGKEVPIRDIYAGR
  321-  334 (24.87/14.96)	RYQELPPSPVEAPR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.82|      29|      30|     745|     773|       4
---------------------------------------------------------------------------
  745-  773 (53.77/30.48)	GSGSDSNKARTPSPDETAVPARQPTPDMR
  776-  804 (53.05/29.96)	GVGSSGGNDLPMVEDETAEPEDDISPEMR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.26|      26|      34|     884|     912|       5
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  884-  912 (37.04/28.82)	VTSPSEANvVVAVSTGQrTGSrPA..APPKP
  920-  947 (43.22/20.91)	VNSVSTGN.VNSVSTGN.AGT.PAsvAPDSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.94|      11|      18|     663|     674|       6
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  663-  674 (14.28/12.19)	LRhARTEIETER
  684-  694 (18.66/ 9.94)	LR.AKEEEESNR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     154.75|      47|      61|     135|     184|       7
---------------------------------------------------------------------------
  135-  184 (74.26/71.49)	IFDDVAEGvACMHYLKPPLL..HRDLKVENVLISRASASVCYKLCDFgsAAP
  198-  246 (80.48/63.95)	IEDDVQRH.TTLQYRSPEMIdvYRKQPIDEKSDIWALGVLLYKLCYY..TTP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.06|      15|      17|     252|     267|       9
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  252-  267 (24.32/20.21)	QMAILNASFkFPPYPQ
  271-  285 (24.73/15.10)	QLKLLIATM.LKETPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.80|      15|      34|     609|     629|      10
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  609-  629 (19.73/24.57)	VTRSKSANAAKvrpvsvHAGG
  646-  660 (26.07/15.15)	VVRTTTAAAAN......YEGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.38|      14|     672|     360|     376|      13
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  341-  354 (26.10/11.91)	PPMQETRIIPEIAP
  363-  376 (25.28/ 7.38)	PSSQQSSAKPSPSP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     189.30|      63|    1008|      44|     117|      14
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   44-  117 (94.91/91.84)	PQPVDDVDTAvlkRvaVPDKMAlanmRTEVETMKK....LKGHR.HIVTYIDSHASQLRGG....GYEVFLLMEYCdgGGLID
 1058- 1129 (94.39/62.25)	PEIIDYVDAS...R..NPDIYT....REFVELVQRgnqdLKGKQaAFASFRDVLAREMRGAmpecTHEVNRAVEAT..GGVID
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11214 with Med10 domain of Kingdom Fungi
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