<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11199
Description |
Mediator of RNA polymerase II transcription subunit 5 |
Sequence | MASEQWRTFLHRCLMHRIDATEFRDLSKLLFSKCSISETNLIDALLECRAATGVKWDPLLPLYIDCLCKMGKVNPSTVLGSLLKHSSIHDKPQSPSTPAKKQQKCYTLMTDIRVVQDVMLSISTGNTPQTLAEAINIFSAVVEWIQAVISWHNSHVDQNQQTGGLMSSPDVVSLFESLGILLAALSGTGKGLDVLSSHSHESVKIKLGQALTAYVPLCVEVSLPLRNRLDSLQKEFNLYGEPASKTLDVSMMEGVNVNALQFEASVMDGAVINSRAGLYIYINAMLVGRPLVDDTLLINYLTNRHGGHYEALIEEITTAAFDVLSNAMYRNESSRTMFVFRSFLVNKLPAFFAAMLAASMVTIPMEMCISHALSRLDPNTFPSFSQMFSMQSNTVLSDVRQEFLFACALHRLIPESSIERLLGENPMQTLPTGGQYIKDELVSQINNSPERTEQLINEIESMEGNAGAIVGAITEVIHNLCNQKETMTLKNICNSLSRRPQALDVILLFRGTRQVLQPLCTLLDSWHWDADEGENQPVYDEFGSILLLVLAFKYRYDLRPYDLGISSNDSFILRLLERGSCTRKLEDLDEKQNKNLGTWIAALFIAEGISEETMSACSPHEFYLLVTTLFNQSLGACEAGKLEFDTLKGGFEYLLEPFLLPSLVVALAWLGNHIWESDSDPSIPLKTLQSLVTPSSISGEGKAIHRTVLQIAARNLEEQLKDVRANHPNRTDIKPILDALEPYLSFQRVGSSRKSELESWTTSSGGGLLGSIRNTFQSLVLWSTNPDISMAPHSYTHRQLIAGVRLLGSVRVLRGLIEELKMQSEGGSGDIALDVAATMICAPMAESFDIDPTDQVEPKQEPLPRCPILTLRDALVLQHQSVPRISEKDPLRAEVIVRLYRRVNALSSPPSQVPNLDVSNIIHNMQLGVEGSGQMELEPPAQEPGNGVGEVDIHQMLDKATAAAAAGYDGGVGVGQEMGLEGGMDTSIDDVLNAADMAVGNPEFLDLDMEGMF |
Length | 1013 |
Position | Tail |
Organism | Aspergillus wentii DTO 134E9 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus>
Aspergillus subgen. Cremei.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.046 |
Instability index | 47.08 |
Isoelectric point | 4.98 |
Molecular weight | 111600.46 |
Publications | PubMed=28196534
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Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 ARBA:ARBA00003669
ECO:0000256 RuleBase:RU364142
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11199
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 251.06| 79| 300| 348| 540| 1
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449- 533 (127.68/197.64) PERTEQLINEIESMEGNAGAIVGAITEV.IHNLCNQketmtLK....NICNSLSRRPqALDVILLFRGTRQVLQPLCTLLDSWHWDADEG
684- 767 (123.38/35.05) PLKTLQSLVTPSSISGEGKAIHRTVLQIaARNLEEQ.....LKdvraNHPNRTDIKP.ILDALEPYLSFQRVGSSRKSELESWTTSSGGG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 333.65| 111| 478| 74| 203| 2
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74- 203 (154.16/147.82) NPSTVLgSLLKHSSIHDKPQSPStpaKKQQKcyTLMTDIrvvqdVMLSISTGNTPQTL.AEAINIFSAVVEWI..QAVISWHNSHVDQNQQTGGL..MSSPdvVsLFESLGILLAALsgtgkGLDVLSSHSHESV
568- 683 (179.49/115.35) NDSFIL.RLLERGSCTRKLEDLD...EKQNK..NLGTWI.....AALFIAEGISEETMsACSPHEFYLLVTTLfnQSLGACEAGKLEFDTLKGGFeyLLEP..F.LLPSLVVALAWL.....GNHIWESDSDPSI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 100.88| 33| 673| 216| 255| 3
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216- 255 (52.82/51.76) PLCVEVSLPLRNRLDSLQKefnlygePASK..TLDVS.....MMEGV
890- 929 (48.06/31.11) PLRAEVIVRLYRRVNALSS.......PPSQvpNLDVSniihnMQLGV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.47| 16| 391| 3| 18| 4
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3- 18 (32.49/22.53) SEQWRTFLHRCLMHRI
397- 412 (28.98/19.30) SDVRQEFLFACALHRL
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