<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11120
Description |
Mediator of RNA polymerase II transcription subunit 8 |
Sequence | MQREEKQLEACLDALISQVSDIKNSLVGFIHKLENEYDRLTWPSVLDSFALLSGQLNTLNKVLKNEKTPLLRNQVIIPLLLSPDRDEEIMRLTEGRVPVFSHEVVPDHLRTKPDPDVEELEKQISADAARLTSEAAQKQVQSMNKMCSNLLDKISKEERESELGSLRQNKQTFNPTDTNALVAAVAFGKGLSNRRPPGQGGPMAPGQTGASGMIPGAAGMQQVPMSLSQNQQQQQHMAGVSMSQGSQPGKMPSSIKTNIKSASMHPYQR |
Length | 269 |
Position | Head |
Organism | Xenopus laevis (African clawed frog) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Amphibia>
Batrachia> Anura> Pipoidea> Pipidae> Xenopodinae> Xenopus> Xenopus.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -0.570 |
Instability index | 52.72 |
Isoelectric point | 6.98 |
Molecular weight | 29593.37 |
Publications | PubMed=27762356
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364144
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP11120
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 151.72| 43| 58| 165| 207| 1
---------------------------------------------------------------------------
165- 207 (75.40/38.99) SLRQNKQTFNPTDTNALVAAVAFGKGLSNRRPPGQGGPMAPGQ
226- 268 (76.32/39.54) SLSQNQQQQQHMAGVSMSQGSQPGKMPSSIKTNIKSASMHPYQ
---------------------------------------------------------------------------
|