<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11117

Description Uncharacterized protein
SequenceMAAMSVSIYTLPAMESQLQSIFEEMVKTEIIEEAFAGMFMDTPEDERTKLISCLGAFRQYWSVLPQESHEQCVQWIVKFIHGQHSPKRISFLYDCLAMAVETGLLPPRMVCEALINSDSLEWERTQLWILTFKLIRKIIGGVDYKGVRDLLKVILEKIQTVPDTVSSAVVQQLLAAREVVAYILERNACLLPAYLAVTEVLKLYPEGKLPHWLLGDLVSDFVDSFRPTARIGSICGRCSLLPVVNNSGAICNSWKLDPLTLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQHKQRCPVLEDQLVDLVVYAMERSETEEKYDDGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIPVPDITKPQSTHSFAMTCIWIHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKSLQMTDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGNVNIPLPGSNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKMAQAKSTFALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAGVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTIARATHVTDFFTGSESIQGTWCKDILQTIISFTPHNWALHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSLQGSPPLFLCLLWKMLLETDQINQIGYRVLERIGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEMLNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELIPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMQLRDRTNLKRKLVHAIIGSLKDNRPQGWCLSDTYLKFGMNPRDDNPWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKDVGNALLNVVLKSQPLVPRENITAWMNAIGLIITALPEPYWIVLHDRIVNILNSPSLTSETEWVGYPFQLFDFTACHKAYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLPEVLIPIVKTEYQLLYVYHLIGPFLQRFQQERTRCMIEIGVAFYEMLLNVDQCSTHLSFMDPVCDFLYHMKYMFTGDSIKDQVEKIICNLRPALKLRLRHITHISTESAAPPPPPMNSGSPAPQPNQVPVSVPLTVTQ
Length1382
PositionTail
OrganismXenopus laevis (African clawed frog)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Amphibia> Batrachia> Anura> Pipoidea> Pipidae> Xenopodinae> Xenopus> Xenopus.
Aromaticity0.10
Grand average of hydropathy-0.008
Instability index45.55
Isoelectric point6.77
Molecular weight157906.96
Publications
PubMed=27762356

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11117
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.86|      26|     127|     572|     617|       1
---------------------------------------------------------------------------
  591-  617 (44.58/46.25)	SLGIKG.FISQLLPTV..FKSHAWGiLHTL
  717-  745 (43.28/13.38)	SESIQGtWCKDILQTIisFTPHNWA.LHTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.87|      15|      15|    1008|    1022|       2
---------------------------------------------------------------------------
 1008- 1022 (28.12/18.81)	YKFHDRPVTYLYNTL
 1025- 1039 (25.75/16.59)	YEMQLRDRTNLKRKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     187.14|      61|     710|     458|     523|       3
---------------------------------------------------------------------------
  458-  523 (102.52/88.54)	IPIPHSLKLHHEF.LQQSLRNKSLQMTDYKiallCN.AYSTNSECFTLPmGVLVETIYGNGNVN....IP..LP
  538-  580 (56.21/36.60)	MNLLDSLTVHAKMsLIHSIATRVIKMAQAK.............STFALA.PALVET.Y................
 1209- 1245 (28.41/13.02)	..................................CHkAYSEMSCSYTLA...LAHAVWHHSSIGqlslIPkfLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     159.16|      56|     523|     254|     328|       4
---------------------------------------------------------------------------
  254-  328 (71.15/85.06)	WK....LDPLTLRFPLKGLLPydkdLFepQTALLRYVLEQpysrDMVcNMLGLNkqhkqrcpVLED...........QLVDLVVYAMERS
  780-  850 (88.01/50.60)	WKsmtnENDIITHFSLQGSPP....LF..LCLLWKMLLET....DQI.NQIGYR........VLERigaralvahvrTFADFLVYEFSTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     115.46|      34|     710|     202|     243|       5
---------------------------------------------------------------------------
  202-  237 (57.24/43.36)	KLYPEgKLPHWLLGDLVSDFVD...SFRPtARIGSICGR
  939-  975 (58.23/27.74)	KKYPE.KLYFEGLAEQVNPPVQiqpQYLP.IYFGNVCLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.63|      16|     715|      52|      69|       6
---------------------------------------------------------------------------
   52-   69 (26.81/29.18)	SCLGA.....FRQywSVLPQESH
  746-  766 (26.81/17.95)	SCFPAplqafFKQ..NNVPQESR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     186.15|      56|     265|    1045|    1121|       9
---------------------------------------------------------------------------
 1046- 1121 (92.25/83.94)	SLKDNRPQGWClsdtylkfgmNPRddnPWIpddtyycKLIGRLVDTMAGKS..PGPFPNCDWRFNEFPN..PAAHALHVT
 1322- 1381 (93.90/44.93)	SIKDQVEKIIC..........NLR...PAL.......KLRLRHITHISTESaaPPPPPMNSGSPAPQPNqvPVSVPLTVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.41|      20|     783|      95|     116|      11
---------------------------------------------------------------------------
   95-  116 (32.96/26.27)	CLAMAVETGllPPRMVCEALIN
  881-  900 (38.44/24.32)	CLAMRSHEG..NEAQVCYFIIQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.01|      17|     257|     990|    1006|      13
---------------------------------------------------------------------------
  990- 1006 (30.31/16.50)	LIPVSKSLETLL..DHLGG
 1248- 1266 (26.69/13.72)	LIPIVKTEYQLLyvYHLIG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11117 with Med23 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




NANANA









Molecular Recognition Features






MoRF SequenceStartStop




NANANA