<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP11098

Description Uncharacterized protein
SequenceMKLVNLKQAILQAWKERWSDYQWAINMKKFFPKGVTWDILNLAEALLDQAMIGPAPNPLILSYLKYAINSQMVSYSTVLTAISKFDDFSRDLCIQSLLEIMDMFCDNLSCHGKAEECIGLCRALMSALNWLLRCATFYTDKLKDVLDPVAGENHLSMCLQRLKSILGSTKNRALIHIAKLEEPTSWTSVEQSQLRLSESISLLPSVQLRNQAEECVSLIRSIPSMLSVHSDQLQTNGFPTVHAVVMLEGTMNLTGDAQPLVEQMNTVKRMQRIPLHLFLLEVWKACIVGLIESPEGTEELKWTAFTFLKIPQALAKLKKLSSMEQDFNEDMKCAFEYLLKLTPLLDKADQRCNCDCVSLLLQECNKLGLLSEQNMENLMAKRTADREQAPRLKSSENSTIQPNPGLILRAEPTVTNILKTMDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIQLNEFTRHIGVESSKAANVRALLFDISFLMLCHVAQTYGSEMILSEGCPGGEMPFFESWMQTCMPGEGRVLNPDHPCFRHPDIAKVEALVALLNTSTEMKLAQTKWHEVCLSIPAAILEIHNAWENGVLSSEAIQKITDNIKGKVCSLAVCAVAWLVAHVRMLGLDERDKSLQMIRQLGSPMFGDNTLQFYSERVIIMSSILDNMCSEVLQQTTTQIKFSAAGSEPMPYIHRLPPKTPIKEVLRGAFSSTLEKGWVDSRTLHNFDTLLHMGGVYWFCNNLVKELLRETRLEFALRAVELLYAIFCLDMQQLTLTLLGHVLPSLLTDSAKWHMLMDPPGRALAKLSVWCAMTSYSTQNKGQPSPRQRKRHREDIEDYSSLFPLDDTQQSKLMRLLSSNEEEHNVQANPVDRPMNSSLSASQIHNISSKEPLNRVLANLFLLISSVLGAKTAGAQTQFVQWFMEECVESLELGGKGCILQFMPFSMVSELVKVSTLSSPKIVLAITDLTLPLGRRVAAKALTAL
Length988
PositionTail
OrganismXenopus laevis (African clawed frog)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Amphibia> Batrachia> Anura> Pipoidea> Pipidae> Xenopodinae> Xenopus> Xenopus.
Aromaticity0.06
Grand average of hydropathy-0.014
Instability index46.75
Isoelectric point6.47
Molecular weight110512.56
Publications
PubMed=27762356

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP11098
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.55|      21|     222|     161|     184|       1
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  161-  184 (32.86/26.80)	RLKSILGST..KNRALIHIAkleEPT
  391-  413 (34.69/20.41)	RLKSSENSTiqPNPGLILRA...EPT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.97|      41|     490|     297|     386|       4
---------------------------------------------------------------------------
   86-  129 (66.76/18.46)	DDFSRDL.C.......IQSLLEIMDMFCdNLSCHG.KAEECIGLcrALMSALN
  325-  374 (62.21/54.77)	QDFNEDMkCafeyllkLTPLLDKADQRC.NCDCVSlLLQECNKL..GLLSEQN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.31|      25|     491|     297|     323|       5
---------------------------------------------------------------------------
  297-  323 (38.41/31.35)	TEELKWTafTFLKIP.QALAKLKKLSSM
  791-  816 (44.90/29.54)	TDSAKWH..MLMDPPgRALAKLSVWCAM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP11098 with Med24 domain of Kingdom Metazoa
Unable to open file!