Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDQGSRNGSHTNHDRDQRHNGVNGGFYTSEKGQEKGKGRAEPQQNMTPISPTIPNGMNGTFSDHAQNGNGAGNGLAHGMPNRIDQLPPEILHITDGYMPLSLLLSRLAQKSYSGLLATVNDMAQMPSPPPLLNGNASHTSSADDNSPENQAKKKRLLDFVTPTHEAWLKALVITGWSRKAEEVSRAIDIKAHEDREKMHYINAIDLLAGEKRKLILARMPNPDLKTAVPVLTTGKAHWMPDLGYIPPAPLTAKEVLQSLEKLNTLLSIRLNLNDFEAIPPQFKEYTIKSGRATFRVEGEFELDLTIADEDPKSQFWFIDFRFLFTPSAPTLSLRVRNFIENKVNEISLKDGLSGCYKYLHETVLTYKISECKRQAIDLARAKWTDTLRVDGLNRALSVQYWLNRYNGFGSKSWVIIGVHSGKPDDDDPDSSSTSRLFLRWFRDHKEIKDGNIPFDTVNLSIESLLKILTAKHISHIFTAIFDKLILHPIYANKELSFSLTTSANDPSKPELKVQLTNEREICVKIDPISGRFVFSPTNRMIGFYENSLNAPSTDPKDPNRKKIEDPVDKAVRILEFLRYKLLEDDIYSRGMTFGWPKLRERPGIKPNVLSEKVPKNTQSQIWLRRPGWAEDWYLLTCLSTSGARWFLIKLVKRSTPLDPNPNAIGIAAFEKVPINVVWPTINYSFLSALNVYTTAFLSQYANCKYLYDRRVGYQPREGKPSKSLSIPYVCVRLTDLLPQQTRRPWARDYVKLTFQGVEVHATTPDDLAAAAQSLVAATQSSNTSLIQRPSNIKENAVVITEARMTIPLPKAIANLDRKVDPDIAFNPATGTFAFRLRSAVGEPVIPEMKERIVSIERLVQFVQVLQKHEKTLHCETVSLGKIVFLYSHGSPGDSNGEYMATQLPQYRATVDFSTAEKKMKLILEKGNPHIRIADFLGKVLNTTEGLNGVATILALTLPVLKGLNAIENAWDEDALYDRGEAFVSVRAADWYIIRYNLKHTGPNPDSAPVLQKVLFEVRLRERRGDPWWCIQRTNNNPRPKETDNLDDAFKPLWTSNGANWRGMRKSGVAQGSGAEELLVKMDEVVRNFALSDAIIRVREAAGNPTPAPAARQAPTQAPPSRQQQQQQQLQQQRQQPTPNQSQSQSQGRGQQVKRQVEFVEID |
Length | 1162 |
Position | Tail |
Organism | Phialocephala subalpina |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Helotiales> Mollisiaceae> Phialocephala> Phialocephala fortinii species complex. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.480 |
Instability index | 40.36 |
Isoelectric point | 9.13 |
Molecular weight | 130752.30 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP11074 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.89| 17| 97| 122| 138| 1 --------------------------------------------------------------------------- 123- 139 (31.61/17.46) AQMPSPP.....PLLNGNASHT 217- 238 (26.28/13.12) ARMPNPDlktavPVLTTGKAHW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 185.31| 42| 97| 483| 524| 2 --------------------------------------------------------------------------- 483- 524 (67.19/49.32) KLILHPIYANKELSF...SLTTSANDPS.KPEL...KVQLTNEREICVK 531- 572 (58.08/41.40) RFVFSP..TNRMIGFyenSLNAPSTDPK.DPNR...K.KIEDPVDKAVR 580- 624 (60.04/43.10) KLLEDDIY.SRGMTF...GWPKLRERPGiKPNVlseKVPKNTQSQIWLR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 174.94| 61| 96| 256| 351| 4 --------------------------------------------------------------------------- 241- 307 (91.13/65.15) DLGYI..PPAP................LTAKEVLQSLEKL..NTLLSIRLNLNDFEAIPPQFKEYTiksgrATFRVEGeFELDLTIA 319- 399 (83.81/99.34) DFRFLftPSAPtlslrvrnfienkvneISLKDGLSGCYKYlhETVLTYKISECKRQAIDLARAKWT.....DTLRVDG.LNRALSVQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.04| 11| 120| 625| 636| 5 --------------------------------------------------------------------------- 625- 636 (20.66/14.68) RPgWAEDWYLLT 743- 753 (23.37/11.61) RP.WARDYVKLT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 82.29| 25| 260| 818| 843| 7 --------------------------------------------------------------------------- 818- 843 (39.69/30.08) KVDpDIAFNPATGTFAFRLRSAVGEP 1080- 1104 (42.61/26.81) KMD.EVVRNFALSDAIIRVREAAGNP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 33.43| 12| 705| 199| 216| 8 --------------------------------------------------------------------------- 186- 198 (17.88/19.72) AIDIKAHEDReK..M 203- 216 (15.55/10.73) AIDLLAGEKR.KliL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 38.66| 10| 338| 416| 425| 9 --------------------------------------------------------------------------- 416- 425 (19.76/12.38) IGVHSGKPDD 757- 766 (18.90/11.50) VEVHATTPDD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 118.72| 34| 34| 20| 53| 12 --------------------------------------------------------------------------- 20- 53 (63.06/35.05) NGVNGGFYT.SEKGQEKGKGRAEPQQN.MTPISPTI 55- 90 (55.66/30.14) NGMNGTFSDhAQNGNGAGNGLAHGMPNrIDQLPPEI --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EFVEID 2) RGQQV | 1157 1148 | 1162 1152 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab