<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10959

Description Uncharacterized protein
SequenceMDSIQENSEHSSSSVIALAIKGNKKSKYVVQWALNKFVPEGMIIFKLIHVHPEGNVIPLSQVRSDVVTAFKNEVEWQTNQMLLPFKKLCEQRKVHVDVVILESDDVATAVAEEVAKGPTTKLVVGASSNGIFTSKHTGLSAKASICTPRFCTVYAVSKRKLLIRPSDVQIDESIMHDDASETSFSSNSSPKFTSTSQIDSGSVASYTHMHSSYLSTQQFRARSSKNKTLLSKSSSISKTNHSRGQSLDIGRENTAMSSARNSDFAQCRASSCKSIISDPGSSIYDQNFTKDVPLATELPSRNRQALQLNLLLELHLMAYLQVYAVSKRKLLIRPSDVQIDESIMHDDASETSFSSNSSPKFTSTSQIDSGSVASYTHMHSSYLSTQQFRARSSKNKTLLSKSSSISKTNHSRGQSLDIGRENTAMSSARNSDFAQCRASSCKSIISDPGSSIYDQNFTKDVPLATELPSRNRQANNNLELEKLRIKLRHAQGMHVVAQRENIDASRKLNELSKKRSEESMKLKEIIAKEEMAKKLANYQRRKYEAAEKEVKYLKECAEREATERKEVELKAIHAAKKKVKLKDALSGSSPQYRKFTWDEIMSATSSFSDDLKIGMGAYGIVYKCSLYHTTVAVKVLHSCGNHKTKQFQQELEILSKIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNSTAPIPWFERYRIAWEIASALAFLHSSKPTPIIHRDLKPANILLGRNLVSKIGDIGLSIMLNSDNLSTMYKDTEPVGTLCYIDPEYQRSGVISPKSDVYAFGMVILQLLTAKPAIALTHVVERAIDAGNLTDILDPMAGTWPIHETLDLARLGLKCAELQRRDRPDLKDHVLPTLERLKEVADRTQHSASVVTIKPRPPNHFICPILQDVMDDPCVAADGYTYDCKAIEKWFQENDKSPITNMILPHKNLIPNYTLLSAIIEWKSRKF
Length961
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.06
Grand average of hydropathy-0.415
Instability index43.76
Isoelectric point9.03
Molecular weight107441.35
Publications
PubMed=27557478

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10959
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     406.92|      44|      44|     220|     263|       1
---------------------------------------------------------------------------
  181-  217 (58.41/28.51)	.......ETSFS.SNSSPKFTSTSQIDSGSVASYTHMHSSYLSTQ
  220-  263 (78.40/40.60)	RARSSKNKTLLS.KSSSISKTNHSRGQSLDIGRENTAMSSARNSD
  266-  304 (66.65/33.49)	QCRASSCKSIISdPGSSIYDQNFTKDVPL.....ATELPS.RNRQ
  350-  386 (58.41/28.51)	.......ETSFS.SNSSPKFTSTSQIDSGSVASYTHMHSSYLSTQ
  389-  432 (78.40/40.60)	RARSSKNKTLLS.KSSSISKTNHSRGQSLDIGRENTAMSSARNSD
  435-  473 (66.65/33.49)	QCRASSCKSIISdPGSSIYDQNFTKDVPL.....ATELPS.RNRQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     147.99|      31|     168|     150|     180|       2
---------------------------------------------------------------------------
  121-  140 (23.44/ 9.09)	..........KLVVGASSNGIFTS.KHTGLS
  150-  180 (62.85/34.54)	FCTVYAVSKRKLLIRPSDVQIDESIMHDDAS
  319-  349 (61.70/33.80)	YLQVYAVSKRKLLIRPSDVQIDESIMHDDAS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.30|      18|      39|      55|      74|       3
---------------------------------------------------------------------------
   55-   74 (25.79/24.40)	NVIPLSQvrSDVVTAFKNEV
   97-  114 (28.51/19.30)	DVVILES..DDVATAVAEEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.59|      37|      40|     498|     534|       4
---------------------------------------------------------------------------
  498-  534 (58.72/40.03)	QRENIDASRKLNELSKKRSE.ESMKLKEIIAKE.EMAKK
  539-  577 (50.87/33.71)	QRRKYEAAEKEVKYLKECAErEATERKEVELKAiHAAKK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.35|      35|     135|     662|     698|       6
---------------------------------------------------------------------------
  662-  698 (58.58/51.71)	LLLLLGACP....DHgcLVYEYMENGNLEDRLLRKNSTAPI
  798-  836 (57.78/42.19)	ILQLLTAKPaialTH..VVERAIDAGNLTDILDPMAGTWPI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10959 with Med32 domain of Kingdom Viridiplantae
Unable to open file!