<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10957

Description Uncharacterized protein
SequenceMKLLNPYHAPSLSQFTFQASSTSQLPLQTMEEDDEQCSQMVHVALGKSLVKASNLLQWAFTHFKNTKICILHVYQPSSTIPTPLGKLPASKANPEMVSAFRREEREQTRNLLDKYLSICRAAKVKASIIMTEAGQVQKGIVDLVMRHHIRKLVIGAVPENCMKVKRNYGKANYTANNAPPFCEIWVIYKRKHIWTRDASEIPSSLSSCAQPDIENEIIETEAISSSKSSSCKSCSYQNSDGGSLDIDSEVTKERINSQLTETQREADAATNEASTGLLKCKRLEIEAMEAIKKVNLFESAHARELKLRKEVEDTLRATVKEQQKLMYESEQIAIELQRTMRNIALLDSRAQEANRRRDEAADELSLIQASISILWHERQQIRRRKMEALQWLERWKSRGQVGEAYCNGVIGIPEELPELAEFSLSDLQNATCNFSESFKICQGGYGCIYKGEMLGRTVAIKKFHPCNVQGPAEFHQEVQVLGSLQHPHLLTLLGVCPEAWSIVYEYLPNGTLQDYLFRKGNNSPLTWNTRARIIAEIASALCFLHSSKPETIIHGDLKPEAILLDSSLSCKICDFGFCRLVTEESLGRPSFHLSTEPKGALTYTDPEFQRTGILTPKSDIFSFGLIILQLLTGRSPVGLAFIARNSVSCGKLSSILDFSAGEWPSDVATQLVELGLQCCQKNSRDRPDLTPTLVRELDHLHRSEERPVPSFFLCPILQEIMHDPQVAADGFTYEGDAIREWFISALFTLVP
Length751
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.07
Grand average of hydropathy-0.293
Instability index49.08
Isoelectric point6.30
Molecular weight84385.57
Publications
PubMed=27557478

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10957
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.96|      10|      24|     199|     208|       1
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  199-  208 (18.66/10.91)	SEIPSSLSSC
  225-  234 (19.30/11.55)	SSKSSSCKSC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.58|      23|     331|      56|      87|       3
---------------------------------------------------------------------------
   56-   78 (43.56/16.64)	LQWAFTHFKNT.KICILHVYQPSS
  389-  409 (38.21/13.27)	LQW.LERWK.S.RGQVGEAYCNGV
  427-  441 (13.82/ 8.84)	LQNATCNFSESfKIC.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.33|      25|      25|     335|     359|       4
---------------------------------------------------------------------------
  335-  359 (40.91/34.53)	ELQRTMRNIALLDSRAQEANRRRDE
  363-  387 (42.42/36.13)	ELSLIQASISILWHERQQIRRRKME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     358.47|     117|     135|     444|     578|       5
---------------------------------------------------------------------------
  448-  578 (186.89/174.28)	IYKGEMLGRTvaikKFH.PCNVQGPAEF.HQEVQVLGSLQhPH.........LLTLL.GVCPEAWS.IVYEYLPNGTLQDYLfrkgNNSPLTWNTR.ARIIAEIASALCFlHSSKPETiihgDLKPEAI....LLDSSLSCKICDFGFC
  580-  714 (171.58/113.48)	LVTEESLGRP....SFHlSTEPKGALTYtDPEFQRTGILT.PKsdifsfgliILQLLtGRSPVGLAfIARNSVSCGKLSSIL....DFSAGEWPSDvATQLVELGLQCCQ.KNSRDRP....DLTPTLVreldHLHRSEERPVPSFFLC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10957 with Med32 domain of Kingdom Viridiplantae
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