<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10953

Description Uncharacterized protein
SequenceMAEKQLIVAVESTAAMAPYWDTLLVGYLDKIIRCFAGNNSTGQKSSASNIEFALVTYNTHGCYSGCLVQRTGWTRDPDVFFRWLSTIPFTGGGFNDAAIAEGLAEALMMFQNSQCGDPNQQNLDMQSHCILVSASNPYPLQTPFYIPLLQNLKQIESIDSDPNSCLYDAEAVAKAYPLLSVSLSVICPKQLPKVKAIYDAGKCNSGAADPAVDAKNSTFLILISESFKEARAALSRSGIASLPSNQSPVKVDSVSATSVIGAPPTSMSSGNVSIANWQPISAGNVAPATVKVEPLPVSSMIAGPAFPHSSSVSCATSTNQGVPSLQTSSPSSASQDNFTSNENVQEPIVSIVQPIRPVNPALANVNILNNLSQVRQVMNYAALSGGTSMGFQSMGQSPVAMHMSNMISSRMTSSVPVTQNVFSSGQSGITSITSSRTLTGPLQAGQNTDIGSLTPASSNLSGSSNIGISQPLYNLQGDVSMGQHVQGMSQGNLSGARTVKNGVNMNQNVMNGLGPSDASSRNGTMIPTPGVSQQAQLGLQPLVNNTANMTLPQQGPGSMQSTQQSKYVKVWEGSLSGLRQGQPVFITKIEGYRNYSASESQYVEKADFLVFRAMNPHGFLSQLHEKKLCAVIQLPSQTLLLSVSDKECRLIGMLLPGEVQSDQKWVDNGLPRNAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWGPGTLMLLLSWCLTLNTMWQMIQLHECVPGTRFDRYIDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACTNCTPIKQSYWILMFGAIHFFLSQLPNFNSVAGVSLAAAVMSLCYSTISWGACLARGRVDNVSYAYKKTTTSDLMFRVFNALGDISFAFAGHAVVLEIQATIPSTPQKPSKVSMWKGAVGAYFINAICYFPVALIGYWTFGRDVPDNVLLALEKPAWLIASANLMVFVHVVGSYQVYAMPVFDLIEKMMIKRLNFPTGLALRLVARTSYVAFTLFVGVTFPFFGDLLGFFGGFGFAPTSYFLPSVMWLIIKKPKRFSINWFINWASISIGVCIMLASTVGGLRNIVTDASTYSFYT
Length1084
PositionUnknown
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.09
Grand average of hydropathy0.142
Instability index43.05
Isoelectric point8.68
Molecular weight116985.35
Publications
PubMed=27557478

Function

Annotated function Carrier protein involved in proton-driven auxin influx. Mediates the formation of auxin gradient from developing leaves (site of auxin biosynthesis) to tips by contributing to the loading of auxin in vascular tissues and facilitating acropetal (base to tip) auxin transport within inner tissues of the root apex, and basipetal (tip to base) auxin transport within outer tissues of the root apex (By similarity). May be involved in lateral roots and nodules formation. 
ECO:0000256	ARBA:ARBA00003124
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
GO - Biological Function
symporter activity	GO:0015293	IEA:UniProtKB-KW
GO - Biological Process
amino acid transport	GO:0006865	IEA:UniProtKB-KW
auxin-activated signaling pathway	GO:0009734	IEA:UniProtKB-KW

Interaction

Binary Interactions











Repeat regions





Repeats

>MDP10953
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.14|      32|     102|     786|     820|       1
---------------------------------------------------------------------------
  786-  820 (52.53/42.83)	IACTNCTPIKQSYWILMFGAihFFLSQLPNFnSVA
  890-  921 (61.61/38.25)	IPSTPQKPSKVSMWKGAVGA..YFINAICYF.PVA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     463.07|     107|     109|     371|     477|       2
---------------------------------------------------------------------------
  236-  288 (42.06/15.10)	..........................................................RSGIAS.LPSNQSPVKVDSVSATSVIGA..PPT..........SMSSGN.VSIANWQPISagNVaPA
  289-  367 (115.69/54.44)	TVKV............EPL..PVSSMIAGPAFPHSSSVSCATSTNqGVPSLQTSSPSSASQ.DN.FTSNENVQEPI.VSIVQPIRPVNPA..........................LA..NV.NI
  371-  477 (176.76/87.07)	LSQVRQVMNYAALSGGTSM..GFQSMGQSPVAMHMSNMISSRMTS.SVPVTQNVFSSGQSGITS.ITSSRTLTGPLQAGQNTDIGSLTPAS..........SNLSGS.SNIGISQPLY..NL.QG
  481-  591 (128.56/61.32)	MGQHVQGMSQGNLSGARTVknGV.NMNQNVMNGLGPSDASSRNGT.MIP.TPGVSQQAQLGLQPlVNNTANMTLPQQG..........PGSmqstqqskyvKVWEGSlSGLRQGQPVFitKI.EG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.28|      24|     102|     933|     956|       3
---------------------------------------------------------------------------
  933-  956 (41.57/29.95)	PDNVLLALEKP.....AWLIASANLMVFV
 1031- 1059 (40.71/29.15)	PSVMWLIIKKPkrfsiNWFINWASISIGV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.14|      36|     769|      62|      99|       5
---------------------------------------------------------------------------
   62-   99 (67.25/47.27)	CYS.....GCLVQrtGW..........TRDPDVFFRWLSTIPFTGGGFNDAAI
  832-  882 (51.90/30.12)	CYStiswgACLAR..GRvdnvsyaykkTTTSDLMFRVFNALGDISFAFAGHAV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.34|      27|      36|     138|     165|       7
---------------------------------------------------------------------------
  118-  161 (33.57/24.71)	PNQQnldmqshcilvsasnpYP.LQTPFYIPLLQNLKQIESIdSD
  162-  199 (36.77/22.07)	PNSC......lydaeavakaYPlLSVSLSVICPKQLPKVKAI.YD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10953 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ITSSRTLTGPLQAGQNTDIGSLTPASSNLS
2) QHVQGMSQGNLSGARTVKNGVNMNQNVMNGLGPSDASSRNGTMIPTPGVSQQAQLGL
3) TSTNQGVPSLQTSSPSSASQDNFTSNENVQE
432
483
316
461
539
346










Molecular Recognition Features






MoRF SequenceStartStop




NANANA