<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10950

Description Uncharacterized protein
SequenceMLEHIIAFLKVSKNNISPSFKEKIGSYEKQIINLINANKPKKGMSSLQQGQLPPAHMHSMSQPQSQVSQVQSHETQINSQLQPTNLQGSVATMPKNNMPSLQHNSMSGVSITQQNMMNSMQPGTSLDSGQGNSMNSPHQVPVSSLQQNPTNQMHQLHQMNDMNDIKARQGMGVKPGVFQQHLTSGQHTAYPHQQLKPGGPYPVSSPQLLQASSPQILQHSSPQVDQQNHLPSSTKVATPLQSSNSPFVGPTPSPPLAPSPMPGDSDKPIPGFSSLSNAANIGHQQTVGAAAPAQSLAIGTPGISASPLLAEFSGPDNALAATSGKSTVTEQPIEHLIRVVKSMSHKTLSAAVSDIGSVISMNDRIAGSAPGSGSRAAVGEDLVSMTNCRLQARNFITQDGTNGIKRMKRYISATPLNVVSSAGSVNDGIIEASDLESTATSSVKRPKTEANHALLEEIREINNQLIDTVVEISDEDIDPTAAAADAEGAEGIIVKCSYGAVALSPTLKSQYASVQMSPIQPSRLLVPVNYPNCSPILLDKCPVESSKESVDLSVKAKSRFSISLRSLSQPMSLREIAKIWDVCARGAISEHAQQSGGGTFSSRYGTWDDCFD
Length612
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.03
Grand average of hydropathy-0.389
Instability index60.58
Isoelectric point6.81
Molecular weight65027.45
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10950
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     251.95|      40|      45|     175|     214|       1
---------------------------------------------------------------------------
   71-   99 (25.91/ 7.20)	............QsHETQ..INSQLQPTN.L..QGSVATMPKNNMP
  122-  149 (41.50/16.02)	PG...T.SLDSGQ.GNSMnsPH.QV........PVSS...LQ.QNP
  175-  214 (79.76/37.68)	PGVFQQ.HLTSGQ.HTAY..PHQQLKPGGPY..PVSSPQLLQASSP
  222-  260 (51.56/21.72)	PQVDQQnHLPSST.KVAT..PLQ..SSNSPFvgPTPSPPL..APSP
  279-  315 (53.21/22.65)	ANIGHQ.Q.TVG...AAA..PAQSLAIGTPG..ISASPLLAEFSGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.83|      12|      16|     411|     424|       3
---------------------------------------------------------------------------
  411-  424 (16.06/15.17)	ISATPLNvvSSAGS
  430-  441 (19.77/11.30)	IEASDLE..STATS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10950 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) INANKPKKGMSSLQQGQLPPAHMHSMSQPQSQVSQVQSHETQINSQLQPTNLQGSVATMPKNNMPSLQHNSMSGVSITQQNMMNSMQPGTSLDSGQGNSMNSPHQVPVSSLQQNPTNQMHQLHQMNDMNDIKARQGMGVKPGVFQQHLTSGQHTAYPHQQLKPGGPYPVSSPQLLQASSPQILQHSSPQVDQQNHLPSSTKVATPLQSSNSPFVGPTPSPPLAPSPMPGDSDKPIPGFSSLSNAANIGHQQTVGAAAPAQSL
35
296










Molecular Recognition Features






MoRF SequenceStartStop




NANANA