<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10948

Description Uncharacterized protein
SequenceMQPQVHNPGQQQPVPLPNQPQPRQQILSHNIQNDIAPQPNHPPVSSLAQTPSQNIGHNSNIQSTIGQNSLGSTIGQNSNMQNIFQQNQQANSVQQSTQSMLNQHPQVMRHQQQQTQMNQQQMLPAQQQQQQLMGSQSNAANMQHGQMLGSQNNVGDIQQSQKNNLTNMQQRQQQQLMNQQNNLANMHQQQFGNNAPRLQQQQLLGPESGNSSMQTTHHSGQVRIPIPQQSQQHASNLLPPQAQQSQTQAAQQQLMSQMNPQPAQLQQQFGLQQQPNSLQRDMHQRHQASGSMLQQQSALDQQKQLYQSQRALPETSTTSVDSTAQTSQSSGVDWQEEVYQKIQTMKESYLPELTEMYQRIATKLQQHESLPQQPKSEQLDRARAFRTMLEHIIAFLKVSKNNISPSFKEKIGSYEKQIINLINANKPKKGMSSLQQGQLPPAHMHSMSQPQSQVSQVQSHETQINSQLQPTNLQGSVATMPKNNMPSLQHNSMSGVSITQQNMMNSMQPGTSLDSGQGNSMNSPHQVPVSSLQQNPTNQMHQLHQMNDMNDIKARQGMGVKPGVFQQHLTSGQHTAYPHQQLKPGGPYPVSSPQLLQASSPQILQHSSPQVDQQNHLPSSTKVATPLQSSNSPFVGPTPSPPLAPSPMPGDSDKPIPGFSSLSNAANIGHQQTVGAAAPAQSLAIGTPGISASPLLAEFSGPDNALAATSGKSTVTEQPIEHLIRVVKSMSHKTLSAAVSDIGSVISMNDRIAGSAPGSGSRAAVGEDLVSMTNCRLQARNFITQDGINGIKRMKRKTSAIPLNVVSSAGSVNDGIIEASDLESTATSSVKRPKTEANHALLEEIREINNQLIDTVVEISDEDIDPTAAAADAEGAEGIIVKCSYGAVALSPTLKSQYASVQMSPIQPSRLLVPVNYPNCSPILLDKCPVESSKESVDLSVKAKSRFSISLRSLSQPMSLREIAKIWDVCARGAISEHAQQSGGGTFSSRYGTWDDCFD
Length999
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.03
Grand average of hydropathy-0.709
Instability index68.92
Isoelectric point7.80
Molecular weight108760.11
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10948
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     595.70|      75|      75|     127|     201|       1
---------------------------------------------------------------------------
    2-   48 (50.39/ 9.10)	................................Q..............................PQ..VHNP.GQ.QQP..VPLPNQPQPR.........QQIL.sHNIQNDIAP....Q.P..NHPPVSSLA
   49-  120 (79.25/18.59)	QTPSQNIGH..NSNIQSTigQNslGSTIGQ..N..............................SN..MQNIfQQ.NQQ..AN..SVQQ.S.........TQSM..LNQHPQVMR..HQQ.Q....QTQMNQQ
  127-  201 (137.20/37.64)	QQQQQLMGS..QSNAANM..QH..GQMLGS..Q..............................NN..VGDI.QQ.SQK..NNLTNMQQRQ.........QQQL..MNQQNNLANM.HQQ.QFGNNAPRLQQQ
  209-  274 (74.98/17.19)	GNS.........S....M..QT..THHSG...Q..............................VR..IPIP.QQ.SQQhaSNLLPPQAQQ...sqtqaaQQQL..MSQMNPQPAQ.LQQ.QFG.....LQQQ
  283-  376 (56.71/11.18)	HQRHQASGSmlQQQSALD..QQ..KQLYQS..QralpetsttsvdstaqtsqssgvdwqeevyQK..IQTM.KE.SYL..PELTEMYQRI.........ATKL....QQHE..SL.PQQ..........PKS
  449-  506 (49.53/ 8.82)	QPQSQV..S..QVQSHET..QI..NSQLQP..T..............................NL..QGSV.AT.MPK..NNMPSLQHNS..msgvsitQQNM..MNS........................
  508-  593 (84.99/20.48)	QPGTSLDSG..QGNSMNS..PH..QVPVSSlqQ..............................NP..TNQM.HQlHQM..NDMNDIKARQgmgvkpgvfQQHL..TSGQHT.AYP.HQQlKPGGPYP.VSSP
  612-  679 (62.63/13.13)	DQQNHLPSS..TKVATPL..Q........S..S..............................NSpfVGP..TP.SPP..LAPSPMPGDS.........DKPIpgFSSLSNAANIgHQQ.TVGAAAP.....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     148.03|      42|      62|     724|     765|       2
---------------------------------------------------------------------------
  724-  765 (68.87/40.01)	IRVVKSMSHKT....LSAAVS....DIGSVISMNDRI.........AGSA...PGSGSRAAV
  788-  841 (44.01/23.16)	INGIKRMKRKTsaipLN.VVS....SAGSV...NDGIieasdlestATSSvkrPKTEANHAL
  842-  878 (35.14/17.14)	LEEIREINNQL....IDTVVEisdeDIDPTAAAAD...........AEGA...EG.......
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10948 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ANKPKKGMSSLQQGQLPPAHMHSMSQPQSQVSQVQSHETQINSQLQPTNLQGSVATMPKNNMPSLQHNSMSGVSITQQNMMNSMQPGTSLDSGQGNSMNSPHQVPVSSLQQNPTNQMHQLHQMNDMNDIKARQGMGVKPGVFQQHLTSGQHTAYPHQQLKPGGPYPVSSPQLLQASSPQILQHSSPQVDQQNHLPSSTKVATPLQSSNSPFVGPTPSPPLAPSPMPGDSDKPIPGFSSLSNAANIGHQQTVGAAAPAQSL
2) MQPQVHNPGQQQPVPLPNQPQPRQQILSHNIQNDIAPQPNHPPVSSLAQTPSQNIGHNSNIQSTIGQNSLGSTIGQNSNMQNIFQQNQQANSVQQSTQSMLNQHPQVMRHQQQQTQMNQQQMLPAQQQQQQLMGSQSNAANMQHGQMLGSQNNVGDIQQSQKNNLTNMQQRQQQQLMNQQNNLANMHQQQFGNNAPRLQQQQLLGPESGNSSMQTTHHSGQVRIPIPQQSQQHASNLLPPQAQQSQTQAAQQQLMSQMNPQPAQLQQQFGLQQQPNSLQRDMHQRHQASGSMLQQQSALDQQKQLYQSQRALPETSTTSVDSTAQTSQSSGVD
424
1
683
333










Molecular Recognition Features






MoRF SequenceStartStop




NANANA