<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10947

Description Uncharacterized protein
SequenceMAEKQLIVAVESTAAMGPYWDTILMDYLDKIIRCFGGIDSTGQKPSASNIEFALVTYNTHGCYSGCLVQRTGWTRDPDVFFLWLSAIPFTGGGFNDAAIAEGLSEALMMFPNSQSGGPNQQNVDTHRHCILVSASNPYPLQTPVYIPRLQNLEQSESIDLDPASRLYDAEAVAKAFPQLSVSLSVICAKQLPKVKAIYNSGKRNSRAADPPVDVKNNHFLILISESFMEARAALSRSGITSLPSNQSPVKVDTVSTTQVTGAPPNSMSSVNGSIANRQPISSGNVPSATVKVESVPVSSMVAGPSFPHNSSVPRATSTGQGVPSLQTSSPASTSQDIITSNENVQDTKPVVSMLQSIRPVNPPQANVNILNNLSQARQVINSAALSGGTSMGLQSMGQTPVAMHMSNMISSGMASSVPVAQNVFSSGQSGMTSITSSGPLSGPAQVGQNPGLGSLTSATSKLSGSSSIGISQPSGNLQAAVSMGQQVQGMSQGNLSGAQTVQNGVNMNQNVMGGLGPSVVSSGNGTMIPTPGMSEQAQSGMQSLVNNAAANMTLPQQGSSGMQSTQQQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNFSASETLAANWPPVMQIVRLISQDHMNNKQYVGKADFLVFRAMNPHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAFRLIGMLFPGGLGSGHKWFHKDKFHHKEPITLVEEEAS
Length712
PositionUnknown
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.05
Grand average of hydropathy-0.175
Instability index49.91
Isoelectric point8.40
Molecular weight75178.15
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:EnsemblPlants

GO - Biological Function
DNA binding	GO:0003677	IEA:EnsemblPlants

GO - Biological Process
defense response to fungus	GO:0050832	IEA:EnsemblPlants
jasmonic acid mediated signaling pathway	GO:0009867	IEA:EnsemblPlants
positive regulation of defense response	GO:0031349	IEA:EnsemblPlants
positive regulation of flower development	GO:0009911	IEA:EnsemblPlants
positive regulation of transcription, DNA-templated	GO:0045893	IEA:EnsemblPlants
red, far-red light phototransduction	GO:0009585	IEA:EnsemblPlants
response to far red light	GO:0010218	IEA:EnsemblPlants
response to red light	GO:0010114	IEA:EnsemblPlants
trichome branching	GO:0010091	IEA:EnsemblPlants
trichome papilla formation	GO:1905499	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10947
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      95.64|      33|      40|     236|     270|       1
---------------------------------------------------------------------------
  236-  257 (24.27/ 9.82)	.....................RS.....GITS..LPSNqSPVKVDTVSTT
  258-  298 (37.68/17.78)	QVTGAP..PNSmSSVngsianRQ.....PISSgnVPS..ATVKVESVPVS
  299-  334 (33.70/11.79)	SMVAGPsfPHN.SSV.....pRAtstgqGVPS..LQTS.SP.....ASTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      73.88|      17|      19|     527|     543|       3
---------------------------------------------------------------------------
  382-  398 (25.07/ 8.83)	SA...ALSGGTSMGLQSMGQ
  399-  418 (21.06/ 6.21)	TPvamHMSNMISSGMASSVP
  530-  546 (27.75/10.58)	TP...GMSEQAQSGMQSLVN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.84|      15|      17|     464|     480|       5
---------------------------------------------------------------------------
  464-  480 (21.13/17.62)	GSSSIGISQpsGNLQAA
  484-  498 (27.71/15.92)	GQQVQGMSQ..GNLSGA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10947 with Med25 domain of Kingdom Viridiplantae
Unable to open file!