<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10929

Description Uncharacterized protein
SequenceMQRYHAGSCTSAVNNGTIGGPSSRDTGRSDSSSLPANFPVNSRRQQPQLAPYKLKCDKEPLNSRLGVPDFHPQTPNCPEETLTKEYLQSGYRDTVEGLEEAREISLTQAPNFNKTVVLNCKEAIRKRLRAINESRAQKRKAGQVYGAALSGSQLAKPGVFPELRQCSEDFRKKWIEGLSQSHKRLRSLADQVPHGYKRISLLEVLIRNNVPLLRATWFIKVIYLNQVRPGSVGISSGTADKIQLSRSEVWTKDVIIYLQTLMDEFFSKSTSHSTLPTRERSPQMPYTGSMQHKSDPLLSPSDAEEASLHFRWWYIVRLLQWHHAEGLLLPSLVIDWVLNQLQEKDLLVVWQLLLPIVYGLLETVVLSQTYVRTLAGIALRVIRDPAPGGSDLVDNSRRAYTTYALIEMLRYLILAVPDTFVGLDCFPLPPSVVSHTMNDANFVLKSTEAAVKIKNSTDDFGYDDFGYVVSSIHKNAEYLAKAASPGYPGRCLAKVAKALDKSLVLGDLRGAYKFLFEDLCDGTVSEAWVAKVSPCLRLSLKWFETASSSLVYEVFFLCEWATCDFRDFRTTPPSDVKFTGRKDLSQVHIAVRLLKMKMRDMKISLRQTNGRNPRVSDLAKCSNQQQHNQNLVGNASTLKSSSNCVGQSIYESPGPLHDIIVCWIDQHVVHKGEGFKRLHLFMVELIRAGIFYPVAYVRQLIVSGIMDMNVNVVDLEQRKIHYHILKQLPGCFMHEALQESGIVEGPQLDEALKIYLNERRLILRGVLSKHRDDASISSRKRKQYPAYTKDRACTVSIDQRKTALTNTISSESAKHVVNVEELKAAIMLILQLPNSLSNLSTTGSDESEGSIRRPIWSHHSKIDPVEAAPGCEESRRAKRQKITEERSSFVQGHSTAVPDDDDSWWVKKGLKSSEPLKVEQQLKSTKQVTKTRQKNVRKTQSLAQLQASRIEGSQGASTSHVCDNKISCPHHRTGLDGDKLKSVDSRTCQCEDIVSIGKAVKRLRFVEKRAMAVWLMTVVRQVVEENEKNVGKVGQFGRPFSIVDDSSIWWKLGEDELSSILYLMDISDDLVSAAKFLIWLLPKVFNSPNSTIQSGRNVLMPPRNVENQVCCVGEAFLISSLRRYENILVAADLIPEALSSAMYRAAAIVASNGRVSGSGALAFARYLLKKYSSVASVSEWEKTFKATSDARLSSELESGRSVDGELGLLLGVPLGVEDPDDFFRQKISGGRLPSRVGSGMRDIVQRNVEEALHYLLGKDRKPFAAGGTPKGPALEKWDNGYQIAQQIVMGLVECIRQTGGAAQEGDPSLICSAVSAIVGSVGPTLAKMPDFSSGNNYSNTVPATSSLNYARCILRMHITCLCLLKEALGERQSRVFEIALATEVSSAIAGVFAPSKASRSQFQMSPETHDSSTTISNDVGSNSSKIVVARTTKIAAAVSALVVGAVIYGVTSLERMVTVLRLKEGLDVVQFARSTRSNSNGNARSIGAFNKVDTSIEVHLHWFRLLVGNCRTMCEGLVVELLGEPSVIALSRMQCMIPLSLIFPPAYSIFAFVKWWPIILNPNVAAREDRNHLYESLTTAITDAIKHLPFRDVCFRDSQGLYDLMAVDPCDSEFATLLEVNGSDMHLKSMAFVPLRSRLFLNAMIDCKMPQTIYTKDDGNRLSGPGKSKLKDMVVHVLDTLQPAKFHWQWVELRLLLNEQALIEKLETHDMSLAEAIQLSSPNLEKSAAASENENNFIEILLTRLLVRPDAAPLFSELVHLIGRSLEDSMLLQVKWFLGGLDVLFGRKTIRQRLHNIAESKELSVKTQFWEPWGWCSPCTDPVTIKGSRKKFDTASLEEGEVVEEGIDPKRCLKGSSQVLDSESSSRNQLQVTERALIELLLPCIDQSSDESRNSFANDLIKQLNFIEQQITAATRGANKPVGSTPSGVEGQTNKVSTRKVIKGGGPGLARRATVSTDSSPPSSAALRASVSLRLQLLLRFLPILWTDREPSVRNMRHTLSSVILRLLGSRVVHGDADISMHCSLMGKEVDSSSEAASAALVDSSDEGLFDRLLLVLHGLLSSYSPSWLRQKPFSKMTNGHARGFSGFDREVLETMQNELESMQLPDTIRWRIQAAMPILLPSTQCSFSCQPPHVPVSAVSCLQPITANPGFNSSTSTAPQRNLVPLSRIAANASGKAKQQDNDFEVDPWMLLEDSAGSCLSGSNTASIGSGDNANIRAASWLKGAVREEKVLHSQRAIPWLRAWLTTNLSITSPAIWTCALHGIQFRGLL
Length2271
PositionKinase
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.07
Grand average of hydropathy-0.205
Instability index47.77
Isoelectric point8.76
Molecular weight251493.08
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10929
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.74|      32|     588|    1528|    1562|       1
---------------------------------------------------------------------------
 1528- 1562 (57.47/43.82)	IALSRMQCMIPLSlifPPAYSIFAFVKWWPIILNP
 2119- 2150 (61.27/38.56)	ILLPSTQCSFSCQ...PPHVPVSAVSCLQPITANP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     107.91|      32|     588|    1199|    1232|       2
---------------------------------------------------------------------------
 1199- 1232 (52.11/37.43)	GRSVDGelGLLLGVPLGVEDPDDFFRQKISGGRL
 1763- 1794 (55.80/34.26)	GRSLED..SMLLQVKWFLGGLDVLFGRKTIRQRL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.99|      35|     504|     256|     306|       3
---------------------------------------------------------------------------
  163-  202 (56.81/23.50)	LRQCSEDFRKKwieglSQSHKRL..RSLADQVPH.G...YKRISLL
  258-  298 (50.18/46.54)	LQTLMDEFFSK.....STSHSTLptRERSPQMPYtGsmqHKSDPLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.77|      27|     958|     531|     559|       7
---------------------------------------------------------------------------
  531-  559 (44.79/41.96)	KVSPCLRLSLKWFE.......TASSSLVYEvfFLCE
 1491- 1524 (42.98/31.91)	KVDTSIEVHLHWFRllvgncrTMCEGLVVE..LLGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     133.14|      45|     956|     665|     714|       9
---------------------------------------------------------------------------
  665-  714 (67.57/66.12)	DQHVvhKGEGFKRL..HLFMVELIRAGIFYPVaYVR....QLivSG.....IMDMNVNVVD
 1624- 1679 (65.56/45.82)	DMHL..KSMAFVPLrsRLFLNAMIDCKMPQTI.YTKddgnRL..SGpgkskLKDMVVHVLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.69|      14|     152|     892|     905|      13
---------------------------------------------------------------------------
  892-  905 (29.68/19.18)	GHSTAVPDDDDSWW
 1037- 1050 (29.01/18.55)	GRPFSIVDDSSIWW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     160.35|      55|    1242|      93|     160|      18
---------------------------------------------------------------------------
   93-  160 (82.69/66.38)	DTVEGLEEAREISLTQAPNFNKTVV...LNC....KEAIRKRlrainesraqkrkAGQVYGAALSGS.QLAKPGVF
 1330- 1392 (77.65/43.05)	DFSSGNNYSNTVPATSSLNYARCILrmhITClcllKEALGER.............QSRVFEIALATEvSSAIAGVF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10929 with Med12 domain of Kingdom Viridiplantae
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