<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10928

Description Uncharacterized protein
SequenceMTQISSSTGTKDPEQEQTLDQDKELVLPNPKGSEPVSGEEQEVVASEENKEKPLVDQPVPMEEESVNPATVFCIRLKQPNSNLLHKMSVPEICRNFSAVSWCGKMNAIGCAAETCARIPSSTTNPAFWIPIHIVIPERPTECSVFNVIAGFQPLKPASLVAFVKSLCPYGTIAQTQFLVVILISSADSPRDSVQFIEWSPTSCSRALLIANFHGRVTIWTQPSQGPANLVHDTTCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPSNSKSTFEEKFLSQQSQTSARWPNFLCACSVFSSGSVQLHWSQWPPSQNGKTPKWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQVTPKTSTTCGIPPLSPPNWAGFAPLAAYLFSWQDYLLSEAKQGRKQTDKNLGDAVPLYCSPVSNFSAYVTPEAAAQSAATTTWGSGVTAVAFDPTCGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQQVVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSIPPTNDFKNHPAPGIITDVQRVSVSGSDKSERVNFDPFDLPSDVRTLARVVYSAHGGEIAIAFLRGGVHIFSGPNFSPVDNYQINVGSAIAVPAFSSTSCCSASVWHDSSKDHTILKIIRVLPPAIPTSQVKANSSAWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSSQHRLQYGPSLDRIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPEPWQASAEALNNIDSESMAIEPALAYVDSVLDLASHFITRLRRYASFCRTLATHAVNSGTGSNNRNVVTSPTQSSATPATSQGGQNGSATSMGSTQIAWIQEAIAKISNTTDGASNPTPNPISGPPTFVPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTNMQKPQPNASAPGKVEDITKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSRLGAGGQNGSATSMGSTQIAWIQEAIAKISNTTDGASNPTPNPISGPPTFVPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTNMQKPQPNASAPGKVEDITKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSRLGAGNAGQGYTFDEVKVLFMLLIDLCRRTAALQHPLPISQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGVDAAGLLLRELELYPPAEEWHRRNMFGGPWTDPEDVDFANDAPRLVSSDPHDFSSLEHCDVYNGAQRLWPRKRRMSERDAAFGLNTSVGLGGYLGIMGSRRDVVTAMWKTGLEGVWYKCIRCMRQTSAFTSPDATSSPSQNDNEIRWISRWAYGCPMCGGTWIRVV
Length1440
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.08
Grand average of hydropathy-0.197
Instability index43.28
Isoelectric point6.41
Molecular weight155531.95
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10928
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     179.35|      22|      22|     902|     923|       1
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  902-  923 (48.18/26.63)	ISNTTDGASNPTPN.PISGPPTF
  926-  947 (41.49/21.75)	ISINT.GTFPGTPAvRLIGDCHF
 1062- 1083 (48.18/26.63)	ISNTTDGASNPTPN.PISGPPTF
 1086- 1107 (41.49/21.75)	ISINT.GTFPGTPAvRLIGDCHF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.04|      18|      18|     980|     997|       2
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  980-  997 (40.02/28.12)	NMQKPQPNASAPGKVEDI
 1140- 1157 (40.02/28.12)	NMQKPQPNASAPGKVEDI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     329.11|      93|     157|     878|    1034|       3
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  878- 1034 (164.55/105.11)	GGQNGSATSMGSTQIAWIQEAIAKisnttdgasnptpnpisgpptfvpisintgtfpgtpavrligdchfLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTnmqkpqpnasapgkvediTKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSR
 1038- 1194 (164.55/107.22)	GGQNGSATSMGSTQIAWIQEAIAKisnttdgasnptpnpisgpptfvpisintgtfpgtpavrligdchfLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTnmqkpqpnasapgkvediTKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     676.67|     148|     155|     374|     527|       4
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  134-  255 (113.38/50.33)	......VIPERPTECsvfnviaGFQPLKPASL...VAFV.kSLCPYgTIAQTQFlvviLISSADSPRDSV..QFIEWSPTSCSRallIANFHGRV..TI....................................................WTQPSQGPAnlvhdTTCWqREHEWRQDI.AV..VTKWLSG....
  257-  364 (132.06/59.87)	...........................SPYRWlssKSSA..P.SNS.KSTFEEK....FLSQQSQTSARWPNFL.....CACSV...FSSGSVQLhwSQWPPSQNGKTPKWFytsKGL...LG......CG.....PS........GI.................MAGD.AIIT.ESGAMHV..AGVPIV.NPST
  374-  527 (249.81/131.07)	PGNGFQVTPKTSTTC.......GIPPLSPPNW...AGFA..PLAAY.LFSWQDY....LLSEAKQGRKQTDKNLGDAVPLYCSP...VSNFSAYV..TPEAAAQSAATTTWG...SGV...TAVAFDPTCG.....GSVIAVviveGQymSPYDPDEGPS.....ITGW.RVQRWESSLQQV..VLHPIFGNPTS
  531-  675 (181.43/85.06)	GQPPMQTVWQSKVDL.......SIPPTN........DFKnhPAPGI.ITDVQRV....SVS....GSDKSERVNFDPFDL.PSD...VRTLARVV..YSAHGGEIAIAFLRG....GVhifSGPNFSPVDNyqinvGSAIAV........PAFSSTSCCS.....ASVW.HDSSKDHTILKIirVLPPAI..PTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.44|      23|      27|      14|      36|       5
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   14-   36 (40.73/25.15)	EQE...QTLDQDKELV.LPNPKGSEPV
   40-   66 (30.71/17.04)	EQEvvaSEENKEKPLVdQPVPMEEESV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.48|      12|      26|     677|     688|       6
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  677-  688 (20.96/11.77)	VKANSSAWERAI
  706-  717 (21.52/12.30)	VGCTQSAAEDGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.11|      15|      17|     786|     800|       7
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  786-  800 (28.17/16.10)	AL..INPSALVPEPWQA
  804-  820 (19.95/ 9.14)	ALnnIDSESMAIEPALA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10928 with Med16 domain of Kingdom Viridiplantae
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