<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10928

Description Uncharacterized protein
SequenceMTQISSSTGTKDPEQEQTLDQDKELVLPNPKGSEPVSGEEQEVVASEENKEKPLVDQPVPMEEESVNPATVFCIRLKQPNSNLLHKMSVPEICRNFSAVSWCGKMNAIGCAAETCARIPSSTTNPAFWIPIHIVIPERPTECSVFNVIAGFQPLKPASLVAFVKSLCPYGTIAQTQFLVVILISSADSPRDSVQFIEWSPTSCSRALLIANFHGRVTIWTQPSQGPANLVHDTTCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPSNSKSTFEEKFLSQQSQTSARWPNFLCACSVFSSGSVQLHWSQWPPSQNGKTPKWFYTSKGLLGCGPSGIMAGDAIITESGAMHVAGVPIVNPSTVVVWEVTPGPGNGFQVTPKTSTTCGIPPLSPPNWAGFAPLAAYLFSWQDYLLSEAKQGRKQTDKNLGDAVPLYCSPVSNFSAYVTPEAAAQSAATTTWGSGVTAVAFDPTCGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQQVVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSIPPTNDFKNHPAPGIITDVQRVSVSGSDKSERVNFDPFDLPSDVRTLARVVYSAHGGEIAIAFLRGGVHIFSGPNFSPVDNYQINVGSAIAVPAFSSTSCCSASVWHDSSKDHTILKIIRVLPPAIPTSQVKANSSAWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSSQHRLQYGPSLDRIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVPEPWQASAEALNNIDSESMAIEPALAYVDSVLDLASHFITRLRRYASFCRTLATHAVNSGTGSNNRNVVTSPTQSSATPATSQGGQNGSATSMGSTQIAWIQEAIAKISNTTDGASNPTPNPISGPPTFVPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTNMQKPQPNASAPGKVEDITKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSRLGAGGQNGSATSMGSTQIAWIQEAIAKISNTTDGASNPTPNPISGPPTFVPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTNMQKPQPNASAPGKVEDITKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSRLGAGNAGQGYTFDEVKVLFMLLIDLCRRTAALQHPLPISQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGVDAAGLLLRELELYPPAEEWHRRNMFGGPWTDPEDVDFANDAPRLVSSDPHDFSSLEHCDVYNGAQRLWPRKRRMSERDAAFGLNTSVGLGGYLGIMGSRRDVVTAMWKTGLEGVWYKCIRCMRQTSAFTSPDATSSPSQNDNEIRWISRWAYGCPMCGGTWIRVV
Length1440
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.08
Grand average of hydropathy-0.197
Instability index43.28
Isoelectric point6.41
Molecular weight155531.95
Publications
PubMed=27557478

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10928
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     179.35|      22|      22|     902|     923|       1
---------------------------------------------------------------------------
  902-  923 (48.18/26.63)	ISNTTDGASNPTPN.PISGPPTF
  926-  947 (41.49/21.75)	ISINT.GTFPGTPAvRLIGDCHF
 1062- 1083 (48.18/26.63)	ISNTTDGASNPTPN.PISGPPTF
 1086- 1107 (41.49/21.75)	ISINT.GTFPGTPAvRLIGDCHF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.04|      18|      18|     980|     997|       2
---------------------------------------------------------------------------
  980-  997 (40.02/28.12)	NMQKPQPNASAPGKVEDI
 1140- 1157 (40.02/28.12)	NMQKPQPNASAPGKVEDI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     329.11|      93|     157|     878|    1034|       3
---------------------------------------------------------------------------
  878- 1034 (164.55/105.11)	GGQNGSATSMGSTQIAWIQEAIAKisnttdgasnptpnpisgpptfvpisintgtfpgtpavrligdchfLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTnmqkpqpnasapgkvediTKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSR
 1038- 1194 (164.55/107.22)	GGQNGSATSMGSTQIAWIQEAIAKisnttdgasnptpnpisgpptfvpisintgtfpgtpavrligdchfLHRLCQLLLFCYFFRRTQIPRYSGVANRSADTnmqkpqpnasapgkvediTKPASAVVKSDDGQTGRAGSIVPGAKVVEEASSARSR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     676.67|     148|     155|     374|     527|       4
---------------------------------------------------------------------------
  134-  255 (113.38/50.33)	......VIPERPTECsvfnviaGFQPLKPASL...VAFV.kSLCPYgTIAQTQFlvviLISSADSPRDSV..QFIEWSPTSCSRallIANFHGRV..TI....................................................WTQPSQGPAnlvhdTTCWqREHEWRQDI.AV..VTKWLSG....
  257-  364 (132.06/59.87)	...........................SPYRWlssKSSA..P.SNS.KSTFEEK....FLSQQSQTSARWPNFL.....CACSV...FSSGSVQLhwSQWPPSQNGKTPKWFytsKGL...LG......CG.....PS........GI.................MAGD.AIIT.ESGAMHV..AGVPIV.NPST
  374-  527 (249.81/131.07)	PGNGFQVTPKTSTTC.......GIPPLSPPNW...AGFA..PLAAY.LFSWQDY....LLSEAKQGRKQTDKNLGDAVPLYCSP...VSNFSAYV..TPEAAAQSAATTTWG...SGV...TAVAFDPTCG.....GSVIAVviveGQymSPYDPDEGPS.....ITGW.RVQRWESSLQQV..VLHPIFGNPTS
  531-  675 (181.43/85.06)	GQPPMQTVWQSKVDL.......SIPPTN........DFKnhPAPGI.ITDVQRV....SVS....GSDKSERVNFDPFDL.PSD...VRTLARVV..YSAHGGEIAIAFLRG....GVhifSGPNFSPVDNyqinvGSAIAV........PAFSSTSCCS.....ASVW.HDSSKDHTILKIirVLPPAI..PTS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.44|      23|      27|      14|      36|       5
---------------------------------------------------------------------------
   14-   36 (40.73/25.15)	EQE...QTLDQDKELV.LPNPKGSEPV
   40-   66 (30.71/17.04)	EQEvvaSEENKEKPLVdQPVPMEEESV
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.48|      12|      26|     677|     688|       6
---------------------------------------------------------------------------
  677-  688 (20.96/11.77)	VKANSSAWERAI
  706-  717 (21.52/12.30)	VGCTQSAAEDGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.11|      15|      17|     786|     800|       7
---------------------------------------------------------------------------
  786-  800 (28.17/16.10)	AL..INPSALVPEPWQA
  804-  820 (19.95/ 9.14)	ALnnIDSESMAIEPALA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10928 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GTGSNNRNVVTSPTQSSATPATSQGGQNGS
2) GVANRSADTNMQKPQPNASAPGKVEDITKPASAVVKSDDG
3) GVANRSADTNMQKPQPNASAPGKVEDITKPASAVVKSDDGQT
4) MTQISSSTGTKDPEQEQTLDQDKELVLPNPKGSEPVSGEEQEVVASEENKEKPLVDQPVPM
854
1131
971
1
883
1170
1012
61










Molecular Recognition Features






MoRF SequenceStartStop




1) TKDPEQEQTLDQDKELVLPNP
10
30