<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10911
Description |
Mediator of rna polymerase ii transcription subunit 33a |
Sequence | MKTETVHSIFDTVTELTKSAQEKNTDPLIWAMQLSSSLNSAGVSMPSVAVGEILVNHICWSNNVPIAWKFLEKALTVRIVPPLFVLALLSTRVIPTRRSCPMAYRLYMELLKRYAFSLPSQINGPNYQKIMESINDTLQLSQIFELQGSESGKHVVGYVFMVVWQLLDASLDDEGLLELTAEKKSRWPVATQEMEISNRDGFAGKRVEHREGLCRMNTVLAIEIIGELFGDKLISMILYLARKNMPTHWDSFMQHLQLLVSNSAALRNSKNISPEALVLLISKNLGVLSRECKTSSRQFFHAVMASGSLAFSASRRDAASTSVLWLPIDLFLEDTMDGLQVAATSSADTLTGLVKALQATNRTTWQDTFFGLWISALRLVNRERDSSEGPVPRLDTFLCLLLSITPLAITNIIEEENDSTSSDQRKESTEKRCQALVSSLQQLHDYEALLTPPLPAILLANQAAVKAMMFLSGLSMGSEYFDGMKLNGMPVNCAGNLWHLIVEACIARNILDTSAYLWPGYVKGQCNQVPRSISGPLLGWSSLMKGSLLTPPMVSALVSTPASSLAEIEKIYEIAVNGSDEEKISAATILCGASLARGWNIQEHTVLFITRLLSPCVPSDYCGTESHLISYAPVLNVLLIGISSIDCIQIFSLHGLVPQLAGVLMPICEAFGSCAPNVSWTLMSEKVNSHAVFSNAFTLLLKLWRFDQPPLEHVTRDVPVGSHLTPEYLLLVRNSQLACSEDLLKGQSKSKQLSRTPCRLPEEPIFMDSFPKLKCWYRQNQACIASPLSGLVPGTPVHQIVEALLNFMFRKINSAGQSLTPTTSSGSNSSGSGNEDISPHLKLPAWDILEAVPFVLDAALTACGHGRLSPRELATGLKDLADFLPASLATIASYFSAEVTRGLWKPAFMNGTDWPSPAANLATVEQQIKKILAATGVDVPSLSVGGNSPAILPLPLAVLASLTITYKLERGTDRFLNLVGTALSNLATSCPWPCMPVIAALWAQKVRRWSDFLVFSASRTVFHHSSDAVGQLLRVCFTATLGLGTSSIESNGGVGSLLGHGFGSHFSGGISPVAPGILYLRVHRVVRNVMFMAEEVVTLLMYFVRIIADGGFPAEELEKLKKTRNPMSSLSCHNMESGFPAFCQVSLASAMTRVKLAASLGASLVWITGGLSLVQALLKETLPSWFISAHRSEPNGGVSEGMVSRLRGYALAYFALLSGTFAWGVDSLSPASKWRPSILGAHLEFLASALDGKISLGCNKATWRAYVSGFIGLMVGCTPSWLLEVDVDVLKRLSKGLKRLNEEVLALALLEASGVGAMGIAAEMIIEGGLNFC |
Length | 1333 |
Position | Tail |
Organism | Nicotiana attenuata (Coyote tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.206 |
Instability index | 45.54 |
Isoelectric point | 6.62 |
Molecular weight | 144846.24 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:EnsemblPlants
|
GO - Biological Function | |
GO - Biological Process | phenylpropanoid metabolic process GO:0009698 IEA:EnsemblPlants
regulation of phenylpropanoid metabolic process GO:2000762 IEA:EnsemblPlants
|
Interaction
Repeat regions
Repeats |
>MDP10911
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 119.88| 40| 93| 1183| 1225| 1
---------------------------------------------------------------------------
1183- 1225 (61.23/48.43) PSWFISAHrSEPNGGVSEGMvSRLRGYALAyFALL..SGTFAWGV
1279- 1320 (58.65/33.22) PSWLLEVD.VDVLKRLSKGL.KRLNEEVLA.LALLeaSGVGAMGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 275.29| 91| 99| 493| 590| 4
---------------------------------------------------------------------------
477- 536 (68.47/46.02) ..........................................GSeyfDGMKLNGMPVN.....CAGNL...WHLIVEaciaRNILDTSAYLWPGYVKGQCNQVPRSIS.GP
537- 633 (137.95/92.84) LLGWSSLMKGSLLTppmVSALVSTPASSLAEI.EKIYEIAVNGS...DEEKISAATIL.....CGASLargWN.IQE....HTVLFITRLLSPCVPSDYCGTESHLISyAP
639- 706 (68.86/37.03) LIGISSIDCIQIFS...LHGLVPQLAGVLMPIcEAFGSCAPNVSwtlMSEKVNSHAVFsnaftLLLKL...WRF.....................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 397.30| 109| 516| 246| 396| 5
---------------------------------------------------------------------------
175- 218 (35.47/45.48) ....................................................................GLLE.LTAEKKSRWPVATQEMEISN.RdgFAGKRVEHREG.LCRMNT
286- 396 (177.72/87.62) GVLS.RECKTSSRQFfhAVMASGSLAFSASR.RDAASTSVLWLPIDLFLEDTMDGLQVAATSSADTLTGLVKALQATNRTTWQDTFFGLWISALR..LVNRERDSSEGPVPRLDT
866- 919 (65.98/21.11) GRLSpRELATGLKDL..ADFLPASLATIASY.FSAEVTRGLWKPA..FMNGT.DWPSPAA.......................................................
952- 1034 (118.14/50.21) ....................LPLPLAVLASLtITYKLERGT....DRFLNLVGTALSNLATSCPWPCMPVIAALWAQKVRRWSD..F.LVFSASR..TVFHHSSDAVGQLLR...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.22| 22| 277| 786| 808| 6
---------------------------------------------------------------------------
786- 808 (36.53/29.53) SPLS.GLVPGTP......VHQIVEALLnFM
1064- 1092 (31.69/19.72) SHFSgGISPVAPgilylrVHRVVRNVM.FM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.69| 33| 35| 38| 72| 9
---------------------------------------------------------------------------
24- 61 (43.91/32.75) NTDPLIWAMqLSssLNSAGVsmPSVAVGEILVNHICWS
62- 96 (49.78/30.96) NNVPIAWKF.LEkaLTVRIV..PPLFVLALLSTRVIPT
---------------------------------------------------------------------------
|