<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10879
Description |
Mediator of rna polymerase ii transcription subunit 25 |
Sequence | MVVFTVHGSHGACLVRRSGWTRDINMFSQWLSAIPFSGGGFNDAAVAESLAEALTMFSSLNGSQTQQNVDGQRHCILIAASNPYPLPTPVYHPHMQNVEQSGNIEAHTGNRLSDAETVAKAFPQCSVSLSVICPKQLPKLRAIYNAGKRDPQAADPPIDTSKNPNFLVLISENFIEACAAFNRTGIEISALNQILVEMDMSSVAPVSAPAATFDPAVMSQQPISAGNIPAATVNMEPTTVTSVTGPALPHIPTARPTSQLVASLQSASPISVSEEVVPNNEIVNETKPILSGMTQPLRSFSGAAANARILNDVAQAQALVGGTSIGLQSMGGTPILSNMIPGGISSSTPAAPTVLSSGQLAVTSLSGLVPLAGTGQIAQNSVSASSVSIAPSMSGNSNLCVSQLLSNIQGGVSAVMHQNVLSGTGAGMPFGTGTLMSTPRMIQPRHPGMQPLGRNNSTEANIPLSQQQTSATLSSAQSNYVKVWEGDLSGQRQGEPVLITRLQGFRIASASKSLAADWPQTMQIVRLITQEHLNNDVRRLLGKAEIVVFWAMDQHVFLSQLQEKKLVSVLESKDCFLFCK |
Length | 580 |
Position | Unknown |
Organism | Nicotiana attenuata (Coyote tobacco) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae>
Nicotiana.
|
Aromaticity | 0.04 |
Grand average of hydropathy | 0.019 |
Instability index | 50.33 |
Isoelectric point | 6.42 |
Molecular weight | 61061.82 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP10879
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.13| 16| 66| 329| 345| 1
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329- 345 (27.97/17.78) SMGG......TPILSNmIPGGIS
392- 413 (21.16/ 8.12) SMSGnsnlcvSQLLSN.IQGGVS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 159.07| 36| 116| 237| 272| 2
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203- 225 (32.51/11.49) ..........VAPVSAPAATFDP...........AVMSQQPISA
237- 272 (61.82/27.27) PTT.......VTSVTGPALPHIPTARP.TSQLVASLQSASPISV
274- 299 (28.15/ 9.14) EEV.......V.....PNNEIVNETKPiLSGMTQPLRS......
352- 388 (36.60/13.69) PTVlssgqlaVTSLSG....LVPLA.G.TGQIAQNSVSASSVS.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 203.27| 65| 69| 43| 111| 4
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43- 111 (107.30/88.37) DaavAESLAEALTMFS.SLNGSQTQQnVDGQRHCILIAASNPYPLPTPVYHPHMQN..VEQSGN.IEAHTG.NR
114- 183 (95.97/66.85) D...AETVAKAFPQCSvSLSVICPKQ.LPKLRAIYNAGKRDPQAADPPIDTSKNPNflVLISENfIEACAAfNR
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