<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10861

Description "CLUMA_CG012704, isoform A"
SequenceMDVRSRQQAISKVLMKAWRERWTEYEFGIQIKQCFPSVRLIADANNLTDVIMEQSLIGAGVNKLLLSYLKHSLHSQLISYPAVVMRITKYTNYERYNCIKALLDFLLDIIDGVTCRSKAEESALMSALLSLVFWLIEMTEKLVKHVELNNGPTKEQEHCLEKITTLSHSIIKNKFLMGVLYLAKLEDRELYDKCIINYKRIHNMSKYEVVKIFYQMIFVKLDHMAMKELEQRVVEPITFCLQPFMSIEVLVHSSADTSVHVSKFLMIQKLKRYSTSRLYCEIIRSCFITLCHVKEVNYRIWGAFFLFKLPLILKQIHLQTKTSDDKMDFSEDVIKAFEMLMECTPIVDLMDTTFQCNSIECFLVELMKHNLISEDNFKKIVDKREIAISKLEKFDIPSTPPPINQFVSTIEPTLNGFISSLRDQVMPEVPVLQMFCTLLVENRAFLLYSVASVKAQHKTMINGIVKVNDKSKEILGEASKSKQAVTFYANMFDMSFILLFSIMQKSGCENFPEMTGDYFFEKWCREGMAFPYKSKSPMSIVKMCDQTKVEEMIAYFSDTTTAQSSTISFKWGEICINIPAMLHNVLIAWENETITTVRVKNILDNMRTKMCCFAVIAASWLCSYVKVLREDEQAKPKFMVQQLMKPVDENTMKLETFSEKLSLTHEIIMKLYDSRNSAEILYSQKPLNETFCELWKEISAKRWLPFEVAINLEQLFKSCGAFWLMKNLIEQIFKCKFIKEMETTMDIVFAVMHLNIEACTETLLRDILPIMLLNKSHCSKLKGLQSRMLAKLCVYAILSTMDTADVNRKRPRDDDDDMNSMTKVRKTGIEQQSIGSGIEGSSNDKDISSQLRESLKMSLQDLFKIFYQQVTKDEMSPKVDFIFQFLSLLVQLEKSVKLKSILKLIPNGLIMNLLKIIPEDDVSFGFVLRLYDLSVSSGRALAISELCLLRNIQIRKNSIKL
Length961
PositionTail
OrganismClunio marinus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Nematocera> Chironomoidea> Chironomidae> Clunio.
Aromaticity0.09
Grand average of hydropathy0.003
Instability index46.67
Isoelectric point8.26
Molecular weight111172.77
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10861
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.98|      13|      16|     711|     726|       1
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  706-  719 (20.32/13.97)	FEVAINL.EQLFKsC
  722-  735 (22.65/ 6.21)	FWLMKNLiEQIFK.C
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.18|      10|      16|     412|     421|       3
---------------------------------------------------------------------------
  412-  421 (17.90/ 9.78)	PTLNGFISSL
  430-  439 (19.27/11.09)	PVLQMFCTLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.07|      32|      87|     163|     195|       4
---------------------------------------------------------------------------
  163-  195 (50.64/44.63)	ITTLSH.....SIIKNKFLMgVLYLAKLEDRELYDKCI
  247-  283 (49.43/37.36)	IEVLVHssadtSVHVSKFLM.IQKLKRYSTSRLYCEII
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10861 with Med24 domain of Kingdom Metazoa
Unable to open file!