<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP10821

Description Uncharacterized protein
SequenceMNPNMNMHAMPQQQQQMGAVGQGGPVGVPPNAMMQQSPLMQSSPQQPQQMVSQQQQQQQQQQQQQQMSQNQAQQQQQQQQQQQQQAEKIDNISKVKSLYMPMRESLLMTFRGAAFTLQQNNMADNLKRDTMVNSARFDKYLEEFYAYCDQIEMNLKTAIQCMQQFSSAQKYLPGAVTALRTEPYLQENPSGPMPYPTFLNTVRVHVQSTKDLRDTLISASQNISQAD
Length227
PositionTail
OrganismStomoxys calcitrans (Stable fly) (Conops calcitrans)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Muscoidea> Muscidae> Stomoxys.
Aromaticity0.06
Grand average of hydropathy-0.904
Instability index87.52
Isoelectric point6.73
Molecular weight25925.95
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP10821
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.58|      18|      19|      48|      66|       1
---------------------------------------------------------------------------
   48-   65 (36.81/11.78)	QQMVSQQQQQQQQQQQQQ
   68-   85 (35.77/ 7.85)	SQNQAQQQQQQQQQQQQQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.90|      13|      30|       1|      13|       2
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    1-   13 (27.11/11.51)	MNPNMNMHAMPQQ
   34-   46 (24.79/ 9.95)	MQQSPLMQSSPQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.05|      35|      43|     108|     143|       3
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  108-  143 (55.29/37.13)	MTFRGAAFTLQQNNMADNLKRDTmVNSARFDKYLEE
  153-  187 (60.76/36.29)	MNLKTAIQCMQQFSSAQKYLPGA.VTALRTEPYLQE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP10821 with Med29 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MNPNMNMHAMPQQQQQMGAVGQGGPVGVPPNAMMQQSPLMQSSPQQPQQMVSQQQQQQQQQQQQQQMSQNQAQQQQQQQQQQQQQAEKIDNISK
1
94










Molecular Recognition Features






MoRF SequenceStartStop




NANANA